Evidence map›Paper›PMID 32571872›Full record

ArticleThe Journal of biological chemistry2020

The RNA-binding protein PTBP1 promotes ATPase-dependent dissociation of the RNA helicase UPF1 to protect transcripts from nonsense-mediated mRNA decay.

Sarah E Fritz, Soumya Ranganathan, Clara D Wang, J Robert Hogg

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 54 citations in OpenAlex.

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  12. PARN Maintains RNA Stability to Regulate Insulin Maturation and GSIS in Pancreatic β Cells.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sarah E FritzBiochemistry and Biophysics Center, NHLBI, National Institutes of Health, Bethesda, Maryland, USA.ORCID 0000-0001-6318-4319
Soumya RanganathanBiochemistry and Biophysics Center, NHLBI, National Institutes of Health, Bethesda, Maryland, USA.
Clara D WangBiochemistry and Biophysics Center, NHLBI, National Institutes of Health, Bethesda, Maryland, USA.
J Robert HoggBiochemistry and Biophysics Center, NHLBI, National Institutes of Health, Bethesda, Maryland, USA j.hogg@nih.gov.ORCID 0000-0001-5729-5135
National Institutes of Health · US

Funding

Mechanisms of nonsense-mediated mRNA decay target selectionZIAHL006158 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI HOGG, J ROBERT · 2012 to 2025
$17.9M
mRNP assembly in response to translational repressionZIAHL006169 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI HOGG, J ROBERT · 2013 to 2025
$5.4M
Intramural NIH HHS ZIA HL006158
6 · The paper itself

Abstract

The sequence-specific RNA-binding proteins PTBP1 (polypyrimidine tract-binding protein 1) and HNRNP L (heterogeneous nuclear ribonucleoprotein L) protect mRNAs from nonsense-mediated decay (NMD) by preventing the UPF1 RNA helicase from associating with potential decay targets. Here, by analyzing

Indexed as

Nonsense Mediated mRNA DecayAdenosine TriphosphateHeterogeneous-Nuclear RibonucleoproteinsHumansModels, MolecularPolypyrimidine Tract-Binding ProteinProtein DomainsRNA HelicasesRNA, MessengerTrans-ActivatorsTranscription, GeneticAdenosine TriphosphateHeterogeneous-Nuclear RibonucleoproteinsPolypyrimidine Tract-Binding ProteinPTBP1 protein, humanRNA HelicasesRNA, MessengerTrans-ActivatorsUPF1 protein, human3′-untranslated regionATPasehnRNP Lkinetic proofreadingnonsense-mediated mRNA decaypoly(A)-binding proteinpolypyrimidine tract-binding protein 1 (PTBP1)RNA degradationRNA helicaseRNA metabolismRNA–protein interactionRNA turnovertranscriptomicsUPF1

Identifiers

PMID32571872
PMCPMC7450115
OpenAlexW3036811681

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.