ArticleBMC plant biology2020
Genome-wide identification and characterization of SnRK family genes in Brassica napus.
Article in BMC plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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17 citing papers in PubMed, 43 citations in OpenAlex.
- Evolutionary expansion of theFrontiers in plant science · 2026Article
- Navigating heavy metal stress: emerging roles of TOR and SnRK signaling in plant tolerance.Frontiers in plant science · 2026Review
- Deciphering the heterogeneous glucosinolates composition in leaves and seeds: strategies for developing Brassica napus genotypes with low seed glucosinolates content but high leaf glucosinolates content.Molecular horticulture · 2025Article
- Variance ofFrontiers in genetics · 2025Article
- Genome-Wide Identification and Characterization of theInternational journal of molecular sciences · 2024Article
- Genome-Wide Identification and Expression Analysis of Sucrose Nonfermenting 1-Related Protein Kinase (Plants (Basel, Switzerland) · 2024Article
- Deciphering the regulatory role of PheSnRK genes in Moso bamboo: insights into hormonal, energy, and stress responses.BMC genomics · 2024Article
- Comprehensive Evolution and Expression anaLysis of PHOSPHATE 1 Gene Family in Allotetraploid Brassica napus and Its Diploid Ancestors.Biochemical genetics · 2023Article
- Comprehensive Analysis ofGenes · 2022Article
- Identification and characteristics of SnRK genes and cold stress-induced expression profiles in Liriodendron chinense.BMC genomics · 2022Article
- Abiotic Stresses in Plants and Their Markers: A Practice View of Plant Stress Responses and Programmed Cell Death Mechanisms.Plants (Basel, Switzerland) · 2022Review
- Genome-Wide Identification, Expression Pattern and Sequence Variation Analysis ofPlants (Basel, Switzerland) · 2022Article
- Article
- Genome-wide identification of sucrose non-fermenting-1-related protein kinase genes in maize and their responses to abiotic stresses.Frontiers in plant science · 2022Article
- Article
- Genomic Characterization and Expression Analysis of the SnRK Family Genes inPlants (Basel, Switzerland) · 2021Article
- Genome-wide identification, phylogenetic and expression pattern analysis of GATA family genes in Brassica napus.BMC plant biology · 2020Article
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4 authors at 1 institution in 1 country.
Funding
Abstract
backgroundSucrose non-fermenting 1 related protein kinases (SnRK) play crucial roles in responding to biotic and abiotic stresses through activating protein phosphorylation pathways. However, little information of SnRK genes was available in Brassica napus, one of important oil crops. Recently, the released sequences of the reference genome of B.napus provide a good chance to perform genome-wide identification and characterization of BnSnRK gene family in the rapeseed.
resultsTotally 114 SnRK genes distributed on 19 chromosomes were identified in the genome of B.napus and classified into three subfamilies on the basis of phylogenetic analysis and the domain types. According to gene structure and motif composition analysis, the BnSnRK sequences showed obvious divergence among three subfamilies. Gene duplication and synteny between the genomes of the rapeseed and Arabidopsis were also analyzed to provide insights into the evolutionary characteristics of BnSnRK family genes. Cis-element analysis revealed that BnSnRKs may response to diverse environmental stresses. Moreover, the expression patterns of BnSnRKs in various tissues and under diverse abiotic stresses were distinct difference. Besides, Single Nucleotide Polymorphisms (SNP) distribution analysis suggests the function disparity of BnSnRK family genes in different genotypes of the rapeseed.
conclusionWe examined genomic structures, evolution features, expression patterns and SNP distribution of 114 BnSnRKs. The results provide valuable information for functional characterization of BnSnRK genes in future studies.
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