ArticleeLife2020
A single-cell transcriptomic and anatomic atlas of mouse dorsal raphe
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Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.
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82citing papers in PubMed
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Who cites it
82 citing papers in PubMed.
- Effects of SSRIs on the spatial transcriptome of dorsal raphe serotonin neurons.Molecular psychiatry · 2026Article
- System-level synchronization and subtype-specific modules govern brain-wide serotonin axon innervation.Proceedings of the National Academy of Sciences of the United States of America · 2026Article
- Intrinsic and non-cell-autonomous roles for the neurodevelopmental syndrome-linked transcription factor UNC-3/EBF.Nature communications · 2026Article
- Article
- Intrinsic pH chemosensitivity of acutely dissociated medullary serotonergic and retrotrapezoid neurones.The Journal of physiology · 2026Article
- Dorsal raphe nucleus enkephalin peptide modulates behavioral preference.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2026Article
- Roles of synaptic cell adhesion molecules in the neuromodulatory systems.Molecules and cells · 2026Review
- Early life chronic stress-disrupted activity of the dorsal raphe nucleus selectively drives behavioral impairments.Communications biology · 2026Article
- Rapid dynamics of dorsal raphe serotonin neurons regulate the strength of visual attention.Nature communications · 2026Article
- The lateral habenula as a master regulator of innate and learned social behaviors.Psychopharmacology · 2026Review
- Circuit-specific remodeling of synaptic co-transmission in stress-responsive networks.Animal cells and systems · 2026Review
- Intrinsic and non-cell autonomous roles for a neurodevelopmental syndrome-linked transcription factor.bioRxiv : the preprint server for biology · 2025Article
- Integrated single-cell atlases unveil the operation principles of whole-brain 5-HT neuronal subsystems.Science advances · 2025Article
- Increased c-Fos immunoreactivity in anxiety-related brain regions following paroxetine discontinuation.Neuropharmacology · 2025Article
- Serotonin neurons are necessary for tonic sodium intake inhibition.American journal of physiology. Regulatory, integrative and comparative physiology · 2025Article
- Optogenetic Stimulation of Novel Tph2-Cre Rats Advances Insight into Serotonin's Role in Locomotion, Reinforcement, and Compulsivity.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025Article
- Chemogenetic inhibition of prefrontal cortex inputs to dorsal raphe reduces anxiety behaviors in male rat model of fetal alcohol spectrum disorder.Scientific reports · 2025Article
- Deciphering the Functions of Raphe-Hippocampal Serotonergic and Glutamatergic Circuits and Their Deficits in Alzheimer's Disease.International journal of molecular sciences · 2025Review
- The organization of serotonergic fibers in the Pacific angelshark brain: neuroanatomical and supercomputing analyses.Frontiers in neuroscience · 2025Article
- The role of dorsal raphe nucleus neuropeptides in reward and aversion.Frontiers in behavioral neuroscience · 2025Review
22 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
8 authors.
Benjamin W Okaty *Department of Genetics, Harvard Medical School, Boston, United States.ORCID 0000-0003-1281-2244
Nikita Sturrock *Department of Genetics, Harvard Medical School, Boston, United States.ORCID 0000-0002-1635-6760
Yasmin Escobedo LozoyaDepartment of Genetics, Harvard Medical School, Boston, United States.ORCID 0000-0001-8197-770X
YoonJeung ChangDepartment of Genetics, Harvard Medical School, Boston, United States.ORCID 0000-0001-9549-8208
Rebecca A SenftDepartment of Genetics, Harvard Medical School, Boston, United States.ORCID 0000-0003-0081-4170
Krissy A LyonDepartment of Genetics, Harvard Medical School, Boston, United States.ORCID 0000-0002-4453-8406
Olga V AlekseyenkoDepartment of Genetics, Harvard Medical School, Boston, United States.ORCID 0000-0003-1645-5133
Susan M DymeckiDepartment of Genetics, Harvard Medical School, Boston, United States.ORCID 0000-0003-0910-9881
Funding
TRAINING IN SLEEP, CIRCADIAN &RESPIRATORY NEUROBIOLOGYT32HL007901 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI Charles A Czeisler · 1998 to 2026
$18.5MMouse Neurodevelopmental Behavior CoreU54HD090255 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI POMEROY, SCOTT LOREN · 2016 to 2020
$5.2MGenomic mechanisms of firing rate homeostasisR01MH116223 · NIMH · HARVARD MEDICAL SCHOOL · PI DYMECKI, SUSAN M. · 2018 to 2022
$3.0MDevelopmental gene networks of 5HT neurons in addiction, aggression, and anxietyR01DA034022 · NIDA · HARVARD MEDICAL SCHOOL · PI DYMECKI, SUSAN M. · 2014 to 2018
$3.0MMapping serotonergic neuron subtypes protective for seizure-induced neurological and neurobehavioral changesF31NS108406 · NINDS · HARVARD MEDICAL SCHOOL · PI SENFT, REBECCA ALEXIS · 2018 to 2020
$102kCircuits, serotonergic neurons, and the modulation of behavior: Characterization of a specialized serotonergic neuron subtype responsive to dopamine and central to social behaviorF99NS108515 · NINDS · HARVARD UNIVERSITY · PI LYON, KRISTINE ANNE · 2018 to 2020
$93kHoward Hughes Medical InstituteNHLBI NIH HHS T32 HL007901NICHD NIH HHS U54 HD090255NIDA NIH HHS R01 DA034022NIMH NIH HHS R01 MH116223NINDS NIH HHS F31 NS108406NINDS NIH HHS F99 NS108515
Abstract
Among the brainstem raphe nuclei, the dorsal raphe nucleus (DR) contains the greatest number of
Indexed as
NeuronsTranscriptomeAnimalsDorsal Raphe NucleusFemaleGene Expression ProfilingMaleMiceMice, Inbred C57BLSingle-Cell AnalysisTranscription FactorsFev protein, mouseTranscription Factorsdorsal raphegeneticsgenomicsmouseneuronal diversityneurosciencePet1serotoninserotonin neuronssingle cell RNA-seq
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Read underepoch 390
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.