Evidence map›Paper›PMID 32566401›Full record

ArticlePeerJ2020

DiscoSnp-RAD: de novo detection of small variants for RAD-Seq population genomics.

Jérémy Gauthier, Charlotte Mouden, Tomasz Suchan, Nadir Alvarez, Nils Arrigo, Chloé Riou, Claire Lemaitre, Pierre Peterlongo

Abstract read
In one paragraph

Article in PeerJ, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Evolution letters · 2025
    Article
  4. Article
  5. Review
  6. Genetic Homogeneity ofPathogens (Basel, Switzerland) · 2024
    Article
  7. Taxonomic review ofPeerJ · 2023
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jérémy GauthierUniv. Rennes, Inria, CNRS, IRISA, Rennes, France.
Charlotte MoudenUniv. Rennes, Inria, CNRS, IRISA, Rennes, France.
Tomasz SuchanW. Szafer Institute of Botany, Polish Academy of Sciences, Krakow, Poland.
Nadir AlvarezDepartment of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland.
Nils ArrigoDepartment of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland.
Chloé RiouUniv. Rennes, Inria, CNRS, IRISA, Rennes, France.
Claire LemaitreUniv. Rennes, Inria, CNRS, IRISA, Rennes, France.ORCID 0000-0001-8675-170X
Pierre PeterlongoUniv. Rennes, Inria, CNRS, IRISA, Rennes, France.ORCID 0000-0003-0776-6407

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Restriction site Associated DNA Sequencing (RAD-Seq) is a technique characterized by the sequencing of specific loci along the genome that is widely employed in the field of evolutionary biology since it allows to exploit variants (mainly Single Nucleotide Polymorphism-SNPs) information from entire populations at a reduced cost. Common RAD dedicated tools, such as

Indexed as

DeletionsInsertionsRAD-seqReference-freeSNPsVariants

Identifiers

PMID32566401
PMCPMC7293188

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.