Evidence map›Paper›PMID 32564662›Full record

ArticleThe journal of histochemistry and cytochemistry : official journal of the Histochemistry Society2020

A Sample Preparation Protocol for High Throughput Immunofluorescence of Suspension Cells on an Adherent Surface.

Anna Bäckström, Laura Kugel, Christian Gnann, Hao Xu, Joseph E Aslan, Emma Lundberg, Charlotte Stadler

Open access · hybridAbstract read
In one paragraph

Article in The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  6. Double Labeling Fluorescent Immunocytochemistry.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
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  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Anna BäckströmDepartment of Protein Science, Royal Institute of Technology, Stockholm, Sweden (AB, LK, CG, HX, EL, CS).
Laura KugelDepartment of Protein Science, Royal Institute of Technology, Stockholm, Sweden (AB, LK, CG, HX, EL, CS).
Christian GnannDepartment of Protein Science, Royal Institute of Technology, Stockholm, Sweden (AB, LK, CG, HX, EL, CS).
Hao XuDepartment of Protein Science, Royal Institute of Technology, Stockholm, Sweden (AB, LK, CG, HX, EL, CS).
Joseph E AslanDepartment of Protein Science, Royal Institute of Technology, Stockholm, Sweden (AB, LK, CG, HX, EL, CS).
Emma LundbergDepartment of Protein Science, Royal Institute of Technology, Stockholm, Sweden (AB, LK, CG, HX, EL, CS).
Charlotte StadlerDepartment of Protein Science, Royal Institute of Technology, Stockholm, Sweden (AB, LK, CG, HX, EL, CS).
Oregon Health & Science University · USKTH Royal Institute of Technology · SE

Funding

Pathway Maps of Platelet Phenotype and FunctionR01HL146549 · NHLBI · OREGON HEALTH & SCIENCE UNIVERSITY · PI ASLAN, JOSEPH E · 2019 to 2023
$2.5M
NHLBI NIH HHS R01 HL146549
6 · The paper itself

Abstract

Imaging is a powerful approach for studying protein expression and has the advantage over other methodologies in providing spatial information in situ at single cell level. Using immunofluorescence and confocal microscopy, detailed information of subcellular distribution of proteins can be obtained. While adherent cells of different tissue origin are relatively easy to prepare for imaging applications, non-adherent cells from hematopoietic origin, present a challenge due to their poor attachment to surfaces and subsequent loss of a substantial fraction of the cells. Still, these cell types represent an important part of the human proteome and express genes that are not expressed in adherent cell types. In the era of cell mapping efforts, overcoming the challenge with suspension cells for imaging applications would enable systematic profiling of hematopoietic cells. In this work, we successfully established an immunofluorescence protocol for preparation of suspension cell lines, peripheral blood mononucleated cells (PBMC) and human platelets on an adherent surface. The protocol is based on a multi-well plate format with automated sample preparation, allowing for robust high throughput imaging applications. In combination with confocal microscopy, the protocol enables systematic exploration of protein localization to all major subcellular structures.

Indexed as

Analytic Sample Preparation MethodsAnimalsCell AdhesionFluorescent Antibody TechniqueHumansJurkat CellsRoboticsSurface PropertiesSuspensionsSuspensionsautomated sample preparationconfocal microscopyHuman Protein AtlasimmunofluorescenceorganellePBMCplateletssubcellular profilingsuspension cells

Identifiers

PMID32564662
PMCPMC7350080
OpenAlexW3036110205

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.