Evidence map›Paper›PMID 32564428›Full record

ArticleJournal of the European Academy of Dermatology and Venereology : JEADV2021

Genomic profiling of late-onset basal cell carcinomas from two brothers with nevoid basal cell carcinoma syndrome.

O Hasan Ali, A A Yurchenko, O Pavlova, A Sartori, D Bomze, R Higgins, S S Ring, F Hartmann, D Bühler, F R Fritzsche and 10 more

Open access · greenAbstract read
In one paragraph

Article in Journal of the European Academy of Dermatology and Venereology : JEADV, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 10 institutions in 5 countries.

O Hasan AliDepartment of Dermatology, University Hospital Zurich, Zurich, Switzerland.ORCID https://orcid.org/0000-0001-5185-7520
A A YurchenkoInserm U981, Gustave Roussy Cancer Campus, Université Paris Saclay, Villejuif, France.
O PavlovaService of Dermatology and Venerology, CHUV, Lausanne, Switzerland.
A SartoriDepartment of Genetic Medicine and Development, University of Geneva Medical School, Geneva, Switzerland.
D BomzeInstitute of Immunobiology, Kantonsspital St. Gallen, St. Gallen, Switzerland.
R HigginsDepartment of Dermatology, University Hospital Zurich, Zurich, Switzerland.
S S RingInstitute of Immunobiology, Kantonsspital St. Gallen, St. Gallen, Switzerland.
F HartmannInstitute of Immunobiology, Kantonsspital St. Gallen, St. Gallen, Switzerland.
D BühlerDermatologie Gossau, Gossau, Switzerland.
F R FritzschePATHOdiagnostics AG, Herisau, Switzerland.
W JochumInstitute of Pathology, Kantonsspital St. Gallen, St. Gallen, Switzerland.
A A NavariniDepartment of Dermatology, University Hospital Basel, Basel, Switzerland.ORCID https://orcid.org/0000-0001-7059-632X
A KimDepartment of Dermatology, Columbia University Irving Medical Center, New York, USA.
L E FrenchDepartment of Dermatology and Allergology, Ludwig-Maximilian-University of Munich, Munich, Germany.
E DermitzakisDepartment of Genetic Medicine and Development, University of Geneva Medical School, Geneva, Switzerland.
A M ChristianoDepartment of Dermatology, Columbia University Irving Medical Center, New York, USA.
D HohlService of Dermatology and Venerology, CHUV, Lausanne, Switzerland.
D R BickersDepartment of Dermatology, Columbia University Irving Medical Center, New York, USA.
S I NikolaevInserm U981, Gustave Roussy Cancer Campus, Université Paris Saclay, Villejuif, France.
L FlatzDepartment of Dermatology, University Hospital Zurich, Zurich, Switzerland.
Kantonsspital St. Gallen · CHColumbia University Irving Medical Center · USInserm · FRUniversity Hospital of Lausanne · CHUniversity of Geneva · CHCytodiagnostics (Canada) · CAGossamer Bio (United States) · USLudwig-Maximilians-Universität München · DEUniversity Hospital of Basel · CHUniversity Hospital of Zurich · CH

Funding

Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Parisa Tehranifar · 1985 to 2026
$115.3M
Translational and Precision Medicine Resources Core (TRAP)P30AR069632 · NIAMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MACKAY-WIGGAN, JULIAN M. · 2016 to 2020
$3.9M
Molecular Mechanisms Underlying the Prevention of BCC ResistanceR01ES030481 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BICKERS, DAVID RINSEY, KIM, ARIANNA L · 2020 to 2024
$1.8M
Mechanism-based abrogation of BCC pathogenesisR01ES020344 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BICKERS, DAVID RINSEY · 2012 to 2016
$1.8M
Non-melanoma skin cancer: A model for impact of aging on an environmental diseaseUH3CA213384 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BICKERS, DAVID RINSEY · 2018 to 2020
$422k
ARC 2017Gustave RoussyKrebsforschung Schweiz KFC-3985-08-2016National Institute of Health P30AR069632-01National Institute of Health R01ES020344-04NCI NIH HHS P30 CA013696NCI NIH HHS UH3 CA213384NIAMS NIH HHS P30 AR069632NIEHS NIH HHS R01 ES020344NIEHS NIH HHS R01 ES030481Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung PP00P3_157448
6 · The paper itself

Abstract

backgroundNevoid basal cell carcinoma syndrome (NBCCS) is an autosomal dominant genetic disorder. It is commonly caused by mutations in PTCH1 and chiefly characterized by multiple basal cell carcinomas (BCCs) developing prior to the age of 30 years. In rare cases, NBCCS presents with a late onset of BCC development.

objectiveTo investigate BCC tumorigenesis in two brothers, who showed characteristic features of NBCCS but developed their first BCCs only after the age of 40 years. Two other siblings did not show signs of NBCCS.

resultsWe obtained blood samples from four siblings and nine BCCs from the two brothers with NBCCS. Whole exome sequencing and RNA sequencing revealed loss of heterozygosity (LOH) of PTCH1 in eight out of nine tumours that consistently involved the same haplotype on chromosome 9. This haplotype contained a germinal splice site mutation in PTCH1 (NM_001083605:exon9:c.763-6C>A). Analysis of germline DNA confirmed segregation of this mutation with the disease. All BCCs harboured additional somatic loss-of-function (LoF) mutations in the remaining PTCH1 allele which are not typically seen in other cases of NBCCS. This suggests a hypomorphic nature of the germinal PTCH1 mutation in this family. Furthermore, all BCCs had a similar tumour mutational burden compared to BCCs of unrelated NBCCS patients while harbouring a higher number of damaging PTCH1 mutations.

conclusionsOur data suggest that a sequence of three genetic hits leads to the late development of BCCs in two brothers with NBCCS: a hypomorphic germline mutation, followed by somatic LOH and additional mutations that complete PTCH1 inactivation. These genetic events are in line with the late occurrence of the first BCC and with the higher number of damaging PTCH1 mutations compared to usual cases of NBCCS.

Indexed as

Basal Cell CarcinomaBasal Cell Nevus SyndromeSkin NeoplasmsAdultGenomicsHumansMalePatched-1 ReceptorPatched ReceptorsSiblingsPatched-1 ReceptorPatched Receptors

Identifiers

PMID32564428
PMCPMC7750252
OpenAlexW3036751310

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.