Evidence map›Paper›PMID 32564254›Full record

ArticleExperimental & applied acarology2020

Characterization of the complete mitochondrial genome of Amblyomma ovale, comparative analyses and phylogenetic considerations.

Juan E Uribe, Santiago Nava, Katherine R Murphy, Evelina L Tarragona, Lyda R Castro

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Experimental & applied acarology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 49 citations in OpenAlex.

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  9. The complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 4 countries.

Juan E UribeDepartment of Biodiversity and Evolutionary Biology, Museo Nacional de Ciencias Naturales (MNCN-CSIC), c/ José Gutiérrez Abascal 2, 28006, Madrid, Spain. juanuribearboleda@gmail.com.ORCID http://orcid.org/0000-0002-9215-9689
Santiago NavaInstituto Nacional de Tecnología Agropecuaria, Estación Experimental Agropecuaria Rafaela, Consejo Nacional de Investigaciones Científicas y Técnicas, CC 22, Rafaela, CP 2300, Santa Fe, Argentina.
Katherine R MurphyLaboratories of Analytical Biology, National Museum of Natural History, Smithsonian Institution, Washington, DC, 20013, USA.ORCID http://orcid.org/0000-0001-8898-8719
Evelina L TarragonaInstituto Nacional de Tecnología Agropecuaria, Estación Experimental Agropecuaria Rafaela, Consejo Nacional de Investigaciones Científicas y Técnicas, CC 22, Rafaela, CP 2300, Santa Fe, Argentina.
Lyda R CastroGrupo de Investigación Evolución, Sistemática y Ecología Molecular (GIESEMOL), Universidad del Magdalena, Santa Marta, Magdalena, Colombia.ORCID http://orcid.org/0000-0003-3384-3832
National Agricultural Technology Institute · ARNational Museum of Natural History · USSmithsonian Institution · USUniversity of Magdalena · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, we sequenced two complete mitochondrial genomes of Amblyomma ovale, a tick of public health importance. Sequencing two distinct individuals, the resulting mitochondrial genomes were 14,756 and 14,760 bp in length and maintained the same gene order previously reported in Amblyomma. These were combined with RNA-seq derived mitochondrial sequences from three additional species, Amblyomma aureolatum, Amblyomma maculatum, and Amblyomma moreliae, to carry out mitogenome comparative and evolutionary analyses against all previously published tick mitochondrial genomes. We described a derivative genome rearrangement that isolates Ixodes from the remaining Ixodidae and consists of both a reverse translocation as well as an event of Tandem Duplication Random Loss. Genetic distance analyses indicated that cox2, nd1, nd5, and 16S are good candidates for future population studies in A. ovale. The phylogenetic analyses corroborated the utility of complete mitochondrial genomes as phylogenetic markers within the group. This study further supplements the genome information available for Amblyomma and facilitates future evolutionary and population genetic studies within the genus.

Indexed as

Genome, MitochondrialIxodidaeAnimalsBase SequencePhylogenyEctoparasitesGene rearrangementHard-body ticksMitogenomicsMolecular markersPhylogenetics

Identifiers

PMID32564254
OpenAlexW3036186790

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.