Evidence map›Paper›PMID 32563894›Full record

ArticleComputer methods and programs in biomedicine2020

Automated extraction of auditory brainstem response latencies and amplitudes by means of non-linear curve registration.

Katrin Krumbholz, Alexander James Hardy, Jessica de Boer

Open access · hybridAbstract read
In one paragraph

Article in Computer methods and programs in biomedicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  3. Could Tailored Chirp Stimuli Benefit Measurement of the Supra-threshold Auditory Brainstem Wave-I Response?Journal of the Association for Research in Otolaryngology : JARO · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Katrin KrumbholzSchool of Medicine, Hearing Sciences Group, University of Nottingham, United Kingdom. Electronic address: Katrin.Krumbholz@nottingham.ac.uk.
Alexander James HardySchool of Medicine, Hearing Sciences Group, University of Nottingham, United Kingdom; School of Psychology, University of Nottingham, United Kingdom.
Jessica de BoerSchool of Medicine, Hearing Sciences Group, University of Nottingham, United Kingdom.
University of Nottingham · GB

Funding

Medical Research Council MC_UU_00010/2Medical Research Council MR/S003320/1
6 · The paper itself

Abstract

BACKGROUND AND

objectivesAnimal results have suggested that auditory brainstem responses (ABRs) to transient sounds presented at supra-threshold levels may be useful for measuring hearing damage that is hidden to current audiometric tests. Evaluating such ABRs requires extracting the latencies and amplitudes of relevant deflections, or "waves". Currently, this is mostly done by human observers manually picking the waves' peaks and troughs in each individual response - a process that is both time-consuming and requiring of expert experience. Here, we propose a highly automated procedure for extracting individual ABR wave latencies and amplitudes based on the well-established methodology of non-linear curve registration.

methodsFirst, the to-be-analysed individual ABRs are temporally aligned - either with one another or, if available, with a pre-existing template - by locally compressing or stretching their time axes with smooth and invertible time warping functions. Then, the individual latencies and amplitudes of relevant ABR waves are obtained by picking the latencies of the waves' peaks and troughs on the common (aligned) time axis and combining these with the individual aligned responses and inverse time warping functions.

resultsUsing an example ABR data set with a wide range of response latencies and signal-to-noise ratios (SNRs), we test different choices for fitting the time warping functions. We cross-validate the warping results using independent response replicates and compare automatically and manually extracted latencies and amplitudes for ABR waves I and V. Using a Bayesian approach, we show that, for the best registration condition, automatic and manual data were statistically similar.

conclusionsNon-linear curve registration can be used to temporally align individual ABRs and extract their wave latencies and amplitudes in a way that closely matches results from manual picking.

Indexed as

Evoked Potentials, Auditory, Brain StemHearingAcoustic StimulationAnimalsAuditory ThresholdBayes TheoremHumansCochlear synaptopathyContinuous monotone registrationDynamic time warpingHidden hearing lossSupra-threshold auditory brainstem responses

Identifiers

PMID32563894
PMCPMC7607223
OpenAlexW3035566563

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.