Evidence map›Paper›PMID 32562552›Full record

SynthesisClinical pharmacology and therapeutics2020

Genomewide Meta-Analysis Validates a Role for S1PR1 in Microtubule Targeting Agent-Induced Sensory Peripheral Neuropathy.

Katherina C Chua, Chenling Xiong, Carol Ho, Taisei Mushiroda, Chen Jiang, Flora Mulkey, Dongbing Lai, Bryan P Schneider, Sara R Rashkin, John S Witte and 8 more

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Clinical pharmacology and therapeutics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 43 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
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  5. Article
  6. Article
  7. Review
  8. Evolution of predictive risk factor analysis for chemotherapy-related toxicity.Supportive care in cancer : official journal of the Multinational Association of Supportive Care in Cancer · 2023
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Chemotherapy and peripheral neuropathy.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2021
    Review
  15. Genomewide Association Studies in Pharmacogenomics.Clinical pharmacology and therapeutics · 2021
    Review
  16. Review
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 2 countries.

Katherina C ChuaPharmaceutical Sciences and Pharmacogenomics Graduate Program, University of California San Francisco, San Francisco, California, USA.
Chenling XiongDepartment of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, California, USA.
Carol HoDepartment of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, California, USA.
Taisei MushirodaLaboratory of Genotyping Development, Riken Center for Integrative Medical Sciences, Kanagawa, Japan.
Chen JiangDepartment of Biostatistics and Bioinformatics, Duke University, Durham, North Carolina, USA.
Flora MulkeyDepartment of Biostatistics and Bioinformatics, Duke University, Durham, North Carolina, USA.
Dongbing LaiIndiana University School of Medicine, Indianapolis, Indiana, USA.
Bryan P SchneiderIndiana University School of Medicine, Indianapolis, Indiana, USA.
Sara R RashkinDepartment of Biostatistics and Epidemiology, University of California San Francisco, San Francisco, California, USA.
John S WitteDepartment of Biostatistics and Epidemiology, University of California San Francisco, San Francisco, California, USA.
Paula N FriedmanDepartment of Medicine, Northwestern University, Chicago, Illinois, USA.
Mark J RatainDepartment of Medicine, The University of Chicago, Chicago, Illinois, USA.
Howard L McLeodDeBartolo Family Personalized Medicine Institute, Moffitt Cancer Center, Tampa, Florida, USA.
Hope S RugoDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Lawrence N ShulmanAbramson Cancer Center, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Michiaki KuboLaboratory of Genotyping Development, Riken Center for Integrative Medical Sciences, Kanagawa, Japan.
Kouros OwzarDepartment of Biostatistics and Bioinformatics, Duke University, Durham, North Carolina, USA.
Deanna L KroetzDepartment of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, California, USA.
University of California, San Francisco · USDuke University · USIndiana University School of MedicineRIKEN Center for Integrative Medical Sciences · JPMoffitt Cancer Center · USNorthwestern University · USUniversity of Chicago · USUniversity of Pennsylvania · US

Funding

Member Site CoreU10CA180821 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI Evanthia Galanis · 2014 to 2026
$177.3M
Statistics CoreU10CA180882 · NCI · MAYO CLINIC ROCHESTER · PI Sumithra Jay Mandrekar · 2014 to 2026
$115.0M
THE ALLIANCE NCTN BIOREPOSITORY AND BIOSPECIMEN RESOURCEU24CA196171 · NCI · WASHINGTON UNIVERSITY · PI Mine Cicek, Wendy Frankel · 2015 to 2026
$35.0M
Statistical Methods for Cancer Clinical TrialsP01CA142538 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KOSOROK, MICHAEL R · 2010 to 2019
$21.3M
PHARMACEUTICAL SCIENCES AND PHARMACOGENOMICST32GM007175 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI AHITUV, NADAV, KROETZ, DEANNA L · 1985 to 2021
$7.1M
Northwestern University Lead Academic Participating Site Supplement Year 2UG1CA233320 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI BENSON, AL B, MATEI, DANIELA E · 2019 to 2025
$5.5M
UG1 - NCTN (Network Lead)UG1CA233327 · NCI · UNIVERSITY OF CHICAGO · PI STEVEN J CHMURA, HEDY L KINDLER · 2019 to 2026
$4.4M
Pharmacogenomics of Microtubule Targeting AgentsR01CA192156 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KROETZ, DEANNA L · 2015 to 2019
$3.8M
NCI NIH HHS P01 CA142538NCI NIH HHS R01 CA192156NCI NIH HHS U10 CA180821NCI NIH HHS U10 CA180882NCI NIH HHS U24 CA196171NCI NIH HHS UG1 CA233320NCI NIH HHS UG1 CA233327NIGMS NIH HHS T32 GM007175
6 · The paper itself

Abstract

Microtubule targeting agents (MTAs) are anticancer therapies commonly prescribed for breast cancer and other solid tumors. Sensory peripheral neuropathy (PN) is the major dose-limiting toxicity for MTAs and can limit clinical efficacy. The current pharmacogenomic study aimed to identify genetic variations that explain patient susceptibility and drive mechanisms underlying development of MTA-induced PN. A meta-analysis of genomewide association studies (GWAS) from two clinical cohorts treated with MTAs (Cancer and Leukemia Group B (CALGB) 40502 and CALGB 40101) was conducted using a Cox regression model with cumulative dose to first instance of grade 2 or higher PN. Summary statistics from a GWAS of European subjects (n = 469) in CALGB 40502 that estimated cause-specific risk of PN were meta-analyzed with those from a previously published GWAS of European ancestry (n = 855) from CALGB 40101 that estimated the risk of PN. Novel single nucleotide polymorphisms in an enhancer region downstream of sphingosine-1-phosphate receptor 1 (S1PR1 encoding S1PR

Indexed as

Pharmacogenomic VariantsPolymorphism, Single NucleotideAdultAgedCells, CulturedFemaleGenome-Wide Association StudyHumansMaleMiddle AgedNeuritesPaclitaxelPeripheral Nervous System DiseasesPharmacogeneticsRandomized Controlled Trials as TopicRisk AssessmentPaclitaxelS1PR1 protein, humanSphingosine-1-Phosphate ReceptorsTubulin Modulators

Identifiers

PMID32562552
PMCPMC7718413
OpenAlexW3036303760

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.