Evidence map›Paper›PMID 32561780›Full record

ArticleNature communications2020

MeCP2 regulates gene expression through recognition of H3K27me3.

Wooje Lee, Jeeho Kim, Jung-Mi Yun, Takbum Ohn, Qizhi Gong

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 73 citations in OpenAlex.

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    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Wooje LeeDepartment of Cellular & Molecular Medicine, College of Medicine, Chosun University, Gwangju, 61452, South Korea.ORCID http://orcid.org/0000-0003-4559-6509
Jeeho KimDepartment of Cellular & Molecular Medicine, College of Medicine, Chosun University, Gwangju, 61452, South Korea.ORCID http://orcid.org/0000-0001-6869-3606
Jung-Mi YunDepartment of Food and Nutrition, Chonnam National University, Gwangju, 61186, South Korea.ORCID http://orcid.org/0000-0001-6044-0647
Takbum OhnDepartment of Cellular & Molecular Medicine, College of Medicine, Chosun University, Gwangju, 61452, South Korea. tohn@Chosun.ac.kr.ORCID http://orcid.org/0000-0002-1201-5248
Qizhi GongDepartment of Cell Biology and Human Anatomy, University of California at Davis, School of Medicine, Davis, CA, 95616, USA. qzgong@ucdavis.edu.ORCID http://orcid.org/0000-0002-7453-6508
Chosun University · KRChonnam National University · KRUniversity of California, Davis · US

Funding

Role of MeCP2 in Circuitry Development and PlasticityR01DC011346 · NIDCD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI GONG, QIZHI · 2011 to 2015
$1.6M
NIDCD NIH HHS R01 DC011346
6 · The paper itself

Abstract

MeCP2 plays a multifaceted role in gene expression regulation and chromatin organization. Interaction between MeCP2 and methylated DNA in the regulation of gene expression is well established. However, the widespread distribution of MeCP2 suggests it has additional interactions with chromatin. Here we demonstrate, by both biochemical and genomic analyses, that MeCP2 directly interacts with nucleosomes and its genomic distribution correlates with that of H3K27me3. In particular, the methyl-CpG-binding domain of MeCP2 shows preferential interactions with H3K27me3. We further observe that the impact of MeCP2 on transcriptional changes correlates with histone post-translational modification patterns. Our findings indicate that MeCP2 interacts with genomic loci via binding to DNA as well as histones, and that interaction between MeCP2 and histone proteins plays a key role in gene expression regulation.

Indexed as

AnimalsChromatin Immunoprecipitation SequencingDNADNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA MethylationDNA Methyltransferase 3BGene Expression RegulationGene Knockout TechniquesGenetic LociHCT116 CellsHEK293 CellsHistonesHumansMethyl-CpG-Binding Protein 2MiceDNADNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3BDNMT1 protein, humanHistonesMECP2 protein, humanMecp2 protein, mouseMethyl-CpG-Binding Protein 2Nucleosomes

Identifiers

PMID32561780
PMCPMC7305159
OpenAlexW3035888356

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.