Evidence map›Paper›PMID 32561765›Full record

ArticleNature communications2020

Nonsense-mediated mRNA decay factor UPF1 promotes aggresome formation.

Yeonkyoung Park, Joori Park, Hyun Jung Hwang, Byungju Kim, Kwon Jeong, Jeeyoon Chang, Jong-Bong Lee, Yoon Ki Kim

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Yeonkyoung Park *Creative Research Initiatives Center for Molecular Biology of Translation, Korea University, Seoul, 02841, Republic of Korea.ORCID http://orcid.org/0000-0002-1328-0510
Joori Park *Creative Research Initiatives Center for Molecular Biology of Translation, Korea University, Seoul, 02841, Republic of Korea.ORCID http://orcid.org/0000-0003-2624-5164
Hyun Jung Hwang *Creative Research Initiatives Center for Molecular Biology of Translation, Korea University, Seoul, 02841, Republic of Korea.ORCID http://orcid.org/0000-0002-2687-7519
Byungju Kim *Department of Physics, Pohang University of Science and Technology (POSTECH), Pohang, 37673, Republic of Korea.ORCID http://orcid.org/0000-0001-8838-1861
Kwon JeongCreative Research Initiatives Center for Molecular Biology of Translation, Korea University, Seoul, 02841, Republic of Korea.
Jeeyoon ChangCreative Research Initiatives Center for Molecular Biology of Translation, Korea University, Seoul, 02841, Republic of Korea.ORCID http://orcid.org/0000-0002-0117-9116
Jong-Bong LeeDepartment of Physics, Pohang University of Science and Technology (POSTECH), Pohang, 37673, Republic of Korea. jblee@postech.ac.kr.ORCID http://orcid.org/0000-0003-2235-1912
Yoon Ki KimCreative Research Initiatives Center for Molecular Biology of Translation, Korea University, Seoul, 02841, Republic of Korea. yk-kim@korea.ac.kr.ORCID http://orcid.org/0000-0003-1303-072X
Korea University · KRPohang University of Science and Technology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nonsense-mediated mRNA decay (NMD) typifies an mRNA surveillance pathway. Because NMD necessitates a translation event to recognize a premature termination codon on mRNAs, truncated misfolded polypeptides (NMD-polypeptides) could potentially be generated from NMD substrates as byproducts. Here, we show that when the ubiquitin-proteasome system is overwhelmed, various misfolded polypeptides including NMD-polypeptides accumulate in the aggresome: a perinuclear nonmembranous compartment eventually cleared by autophagy. Hyperphosphorylation of the key NMD factor UPF1 is required for selective targeting of the misfolded polypeptide aggregates toward the aggresome via the CTIF-eEF1A1-DCTN1 complex: the aggresome-targeting cellular machinery. Visualization at a single-particle level reveals that UPF1 increases the frequency and fidelity of movement of CTIF aggregates toward the aggresome. Furthermore, the apoptosis induced by proteotoxic stresses is suppressed by UPF1 hyperphosphorylation. Altogether, our data provide evidence that UPF1 functions in the regulation of a protein surveillance as well as an mRNA quality control.

Indexed as

Nonsense Mediated mRNA DecayAutophagyCodon, NonsenseDynactin ComplexEukaryotic Initiation FactorsHEK293 CellsHeLa CellsHumansMolecular ImagingPeptide Elongation Factor 1PhosphorylationProteasome Endopeptidase ComplexProtein AggregatesRNA HelicasesRNA, MessengerSingle Molecule ImagingCodon, NonsenseCTIF protein, humanDCTN1 protein, humanDynactin ComplexEEF1A1 protein, humanEukaryotic Initiation FactorsPeptide Elongation Factor 1Proteasome Endopeptidase ComplexProtein AggregatesRNA HelicasesRNA, MessengerTrans-ActivatorsUbiquitinUPF1 protein, human

Identifiers

PMID32561765
PMCPMC7305299
OpenAlexW3036590837

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.