Evidence map›Paper›PMID 32561749›Full record

ArticleScientific data2020

A clinically and genomically annotated nerve sheath tumor biospecimen repository.

Kai Pollard, Jineta Banerjee, Xengie Doan, Jiawan Wang, Xindi Guo, Robert Allaway, Shannon Langmead, Bronwyn Slobogean, Christian F Meyer, David M Loeb and 7 more

Open access · goldAbstract readDataset
In one paragraph

Article in Scientific data, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.2field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. MTA-Cooperative PRMT5 Inhibitors Are Efficacious in MTAP-Deleted Malignant Peripheral Nerve Sheath Tumor Models.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
    Article
  5. Article
  6. Article
  7. DLK1 Distinguishes Subsets of NF1-Associated Malignant Peripheral Nerve Sheath Tumors with Divergent Molecular Signatures.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Spatial Gene-Expression Profiling Unveils Immuno-oncogenic Programs of NF1-Associated Peripheral Nerve Sheath Tumor Progression.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. MEK Inhibition Synergizes with TYK2 Inhibitors in NF1-Associated Malignant Peripheral Nerve Sheath Tumors.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 1 country.

Kai PollardSidney Kimmel Comprehensive Cancer Center and Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, USA.
Jineta BanerjeeSage Bionetworks, Seattle, USA.
Xengie DoanSage Bionetworks, Seattle, USA.
Jiawan WangSidney Kimmel Comprehensive Cancer Center and Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, USA.
Xindi GuoSage Bionetworks, Seattle, USA.
Robert AllawaySage Bionetworks, Seattle, USA.ORCID http://orcid.org/0000-0003-3573-3565
Shannon LangmeadDepartment of Neurology, Johns Hopkins University School of Medicine, Baltimore, USA.
Bronwyn SlobogeanDepartment of Neurology, Johns Hopkins University School of Medicine, Baltimore, USA.
Christian F MeyerSidney Kimmel Comprehensive Cancer Center and Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, USA.
David M LoebAlbert Einstein College of Medicine, New York, USA.
Carol D MorrisSidney Kimmel Comprehensive Cancer Center and Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, USA.
Allan J BelzbergDepartment of Neurology, Johns Hopkins University School of Medicine, Baltimore, USA.
Jaishri O BlakeleySidney Kimmel Comprehensive Cancer Center and Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, USA.
Fausto J RodriguezSidney Kimmel Comprehensive Cancer Center and Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, USA.ORCID http://orcid.org/0000-0001-8662-1219
Justin GuinneySage Bionetworks, Seattle, USA.
Sara J C GoslineSage Bionetworks, Seattle, USA. sara.gosline@sagebionetworks.org.ORCID http://orcid.org/0000-0002-6534-4774
Christine A PratilasSidney Kimmel Comprehensive Cancer Center and Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, USA. cpratil1@jhmi.edu.
Johns Hopkins University · USSage Bionetworks · USAlbert Einstein College of Medicine · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nerve sheath tumors occur as a heterogeneous group of neoplasms in patients with neurofibromatosis type 1 (NF1). The malignant form represents the most common cause of death in people with NF1, and even when benign, these tumors can result in significant disfigurement, neurologic dysfunction, and a range of profound symptoms. Lack of human tissue across the peripheral nerve tumors common in NF1 has been a major limitation in the development of new therapies. To address this unmet need, we have created an annotated collection of patient tumor samples, patient-derived cell lines, and patient-derived xenografts, and carried out high-throughput genomic and transcriptomic characterization to serve as a resource for further biologic and preclinical therapeutic studies. In this work, we release genomic and transcriptomic datasets comprised of 55 tumor samples derived from 23 individuals, complete with clinical annotation. All data are publicly available through the NF Data Portal and at http://synapse.org/jhubiobank.

Indexed as

Cell Line, TumorGenomicsHigh-Throughput Nucleotide SequencingHumansNerve Sheath NeoplasmsNeurofibromatosis 1Transcriptome

Identifiers

PMID32561749
PMCPMC7305302
OpenAlexW3036912908

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.