Evidence map›Paper›PMID 32560105›Full record

ArticleInternational journal of molecular sciences2020

3-D Nucleus Architecture in Oat × Maize Addition Lines.

Dominika Idziak-Helmcke, Tomasz Warzecha, Marta Sowa, Marzena Warchoł, Kinga Dziurka, Ilona Czyczyło-Mysza, Edyta Skrzypek

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
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  5. Article
  6. Plant Cell and Organism Development.International journal of molecular sciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Dominika Idziak-HelmckeInstitute of Biology, Biotechnology, and Environmental Sciences, University of Silesia in Katowice, Jagiellońska 28, 40-032 Katowice, Poland.ORCID 0000-0002-0713-2466
Tomasz WarzechaDepartment of Plant Breeding, Physiology, and Seed Science, University of Agriculture in Kraków, Podłużna 3, 30-239 Kraków, Poland.ORCID 0000-0002-7121-0123
Marta SowaInstitute of Biology, Biotechnology, and Environmental Sciences, University of Silesia in Katowice, Jagiellońska 28, 40-032 Katowice, Poland.
Marzena WarchołDepartment of Biotechnology, The Franciszek Górski Institute of Plant Physiology, Polish Academy of Sciences, Niezapominajek 21, 30-239 Kraków, Poland.
Kinga DziurkaDepartment of Biotechnology, The Franciszek Górski Institute of Plant Physiology, Polish Academy of Sciences, Niezapominajek 21, 30-239 Kraków, Poland.
Ilona Czyczyło-MyszaDepartment of Biotechnology, The Franciszek Górski Institute of Plant Physiology, Polish Academy of Sciences, Niezapominajek 21, 30-239 Kraków, Poland.ORCID 0000-0002-9586-9272
Edyta SkrzypekDepartment of Biotechnology, The Franciszek Górski Institute of Plant Physiology, Polish Academy of Sciences, Niezapominajek 21, 30-239 Kraków, Poland.ORCID 0000-0003-3185-495X
Franciszek Górski Institute of Plant Physiology · PLUniversity of Silesia in Katowice · PLUniversity of Agriculture in Krakow · PL

Funding

Narodowe Centrum Badań i Rozwoju PBS3/B8/17/2015Narodowe Centrum Nauki 2018/02/X/NZ3/01545
6 · The paper itself

Abstract

The nucleus architecture of hybrid crop plants is not a well-researched topic, yet it can have important implications for their genetic stability and usefulness in the successful expression of agronomically desired traits. In this work we studied the spatial distribution of introgressed maize chromatin in oat × maize addition lines with the number of added maize chromosomes varying from one to four. The number of chromosome additions was confirmed by genomic in situ hybridization (GISH). Maize chromosome-specific simple sequence repeat (SSR) markers were used to identify the added chromosomes. GISH on 3-D root and leaf nuclei was performed to assess the number, volume, and position of the maize-chromatin occupied regions. We revealed that the maize chromosome territory (CT) associations of varying degree prevailed in the double disomic lines, while CT separation was the most common distribution pattern in the double monosomic line. In all analyzed lines, the regions occupied by maize CTs were located preferentially at the nuclear periphery. A comparison between the tissues showed that the maize CTs in the leaf nuclei are positioned closer to the center of the nucleus than in the root nuclei. These findings shed more light on the processes that shape the nucleus architecture in hybrids.

Indexed as

AvenaCell NucleusChromosomes, PlantGenetic IntrogressionIn Situ Hybridization, FluorescenceMicrosatellite RepeatsPlant BreedingPlant LeavesPlant RootsZea maysaddition lineAvena sativa L.chromosome territoryGISHhybridnucleusZea mays L.

Identifiers

PMID32560105
PMCPMC7352526
OpenAlexW3035568156

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.