Evidence map›Paper›PMID 32559199›Full record

ArticlePloS one2020

Determining incremental coulombic efficiency and physiological parameters of early stage Geobacter spp. enrichment biofilms.

Benjamin Korth, Jörg Kretzschmar, Manuel Bartz, Anne Kuchenbuch, Falk Harnisch

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Benjamin KorthDepartment of Environmental Microbiology, Helmholtz Centre for Environmental Research-UFZ, Leipzig, Saxony, Germany.ORCID 0000-0002-5105-2439
Jörg KretzschmarBiochemical Conversion Department, DBFZ Deutsches Biomasseforschungszentrum gemeinnützige GmbH, Leipzig, Saxony, Germany.ORCID 0000-0001-5970-6399
Manuel BartzDepartment of Environmental Microbiology, Helmholtz Centre for Environmental Research-UFZ, Leipzig, Saxony, Germany.
Anne KuchenbuchDepartment of Environmental Microbiology, Helmholtz Centre for Environmental Research-UFZ, Leipzig, Saxony, Germany.
Falk HarnischDepartment of Environmental Microbiology, Helmholtz Centre for Environmental Research-UFZ, Leipzig, Saxony, Germany.ORCID 0000-0002-0014-4640
Helmholtz Centre for Environmental Research · DEDeutsches Biomasseforschungszentrum · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Geobacter spp. enrichment biofilms were cultivated in batch using one-chamber and two-chamber bioelectrochemical reactors. Time-resolved substrate quantification was performed to derive physiological parameters as well as incremental coulombic efficiency (i.e., coulombic efficiency during one batch cycle, here every 6h) during early stage biofilm development. The results of one-chamber reactors revealed an intermediate acetate increase putatively due to the presence of acetogens. Total coulombic efficiencies of two-chamber reactors were considerable lower (19.6±8.3% and 49.3±13.2% for 1st and 2nd batch cycle, respectively) compared to usually reported values of mature Geobacter spp. enrichment biofilms presumably reflecting energetic requirements for biomass production (i.e., cells and extracellular polymeric substances) during early stages of biofilm development. The incremental coulombic efficiency exhibits considerable changes during batch cycles indicating shifts between phases of maximizing metabolic rates and maximizing biomass yield. Analysis based on Michaelis-Menten kinetics yielded maximum substrate uptake rates (vmax,Ac, vmax,I) and half-saturation concentration coefficients (KM,Ac,KM,I) based on acetate uptake or current production, respectively. The latter is usually reported in literature but neglects energy demands for biofilm growth and maintenance as well as acetate and electron storage. From 1st to 2nd batch cycle, vmax,Ac and KM,Ac, decreased from 0.0042-0.0051 mmol Ac- h-1 cm-2 to 0.0031-0.0037 mmol Ac- h-1 cm-2 and 1.02-2.61 mM Ac- to 0.28-0.42 mM Ac-, respectively. Furthermore, differences between KM,Ac/KM,I and vmax,Ac/vmax,I were observed providing insights into the physiology of Geobacter spp. enrichment biofilms. Notably, KM,I considerably scattered while vmax,Ac/vmax,I and KM,Ac remained rather stable indicating that acetate transport within biofilm only marginally affects reaction rates. The observed data variation mandates the requirement of a more detailed analysis with an improved experimental system, e.g., using flow conditions and a comparison with Geobacter spp. pure cultures.

Indexed as

AcetatesBatch Cell Culture TechniquesBiofilmsBiomassChromatography, High Pressure LiquidElectron TransportGeobacterKineticsAcetates

Identifiers

PMID32559199
PMCPMC7304624
OpenAlexW3036365623

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.