Evidence map›Paper›PMID 32558378›Full record

ArticleInfluenza and other respiratory viruses2020

Comparative epidemiology, phylogenetics, and transmission patterns of severe influenza A/H3N2 in Australia from 2003 to 2017.

Jing Xia, Dillon C Adam, Aye Moa, Abrar A Chughtai, Ian G Barr, Naomi Komadina, C Raina MacIntyre

Abstract read
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Article in Influenza and other respiratory viruses, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jing XiaBiosecurity Program, Kirby Institute, University of New South Wales, Sydney, NSW, Australia.
Dillon C AdamBiosecurity Program, Kirby Institute, University of New South Wales, Sydney, NSW, Australia.ORCID 0000-0002-7485-9905
Aye MoaBiosecurity Program, Kirby Institute, University of New South Wales, Sydney, NSW, Australia.ORCID 0000-0003-4274-6241
Abrar A ChughtaiSchool of Public Health and Community Medicine, University of New South Wales, Sydney, NSW, Australia.
Ian G BarrWHO Collaborating Centre for Reference and Research on Influenza (VIDRL), Doherty Institute, Melbourne, Vic., Australia.
Naomi KomadinaWHO Collaborating Centre for Reference and Research on Influenza (VIDRL), Doherty Institute, Melbourne, Vic., Australia.
C Raina MacIntyreBiosecurity Program, Kirby Institute, University of New South Wales, Sydney, NSW, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOver the last two decades, Australia has experienced four severe influenza seasons caused by a predominance of influenza A (A/H3N2): 2003, 2007, 2012, and 2017.

methodsWe compared the epidemiology, genetics, and transmission dynamics of severe A/H3N2 seasons in Australia from 2003 to 2017.

resultsSince 2003, the proportion of notifications in 0-4 years old has decreased, while it has increased in the age group >80 years old (P < .001). The genetic diversity of circulating influenza A/H3N2 viruses has also increased over time with the number of single nucleotide polymorphisms significantly (P < .05) increasing. We also identified five residue positions within or near the receptor binding site of HA (144, 145, 159, 189, and 225) undergoing frequent mutations that are likely involved in significant antigenic drift and possibly severity. The Australian state of Victoria was identified as a frequent location for transmission either to or from other states and territories over the study years. The states of New South Wales and Queensland were also frequently implicated as locations of transmission to other states and territories but less so over the years. This indicates a stable but also changing dynamic of A/H3N2 circulation in Australia.

conclusionThese results have important implications for future influenza surveillance and control policy in the country. Reasons for the change in age-specific infection and increased genetic diversity of A/H3N2 viruses in recent years should be explored.

Indexed as

Antigenic VariationAustraliaHemagglutinin Glycoproteins, Influenza VirusHumansInfluenza A Virus, H3N2 SubtypeInfluenza, HumanMutationPhylogenyPhylogeographySeasonsHemagglutinin Glycoproteins, Influenza VirusAustraliaepidemiologyH3N2 subtypeinfluenza A virusphylogeographypublic health

Identifiers

PMID32558378
PMCPMC7578330

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.