Evidence map›Paper›PMID 32558188›Full record

ArticleNeuropsychopharmacology reports2020

Vexin is upregulated in cerebral cortical neurons by brain-derived neurotrophic factor.

Hisatsugu Koshimizu, Shingo Suzuki, Anna Kawai, Ryuichiro Miura, Ken-Ichi Ohta, Takanori Miki, Naoki Adachi, Hidetada Matsuoka

Open access · goldAbstract read
In one paragraph

Article in Neuropsychopharmacology reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Hisatsugu KoshimizuInstitute for Comprehensive Medical Science, Fujita Health University, Toyoake, Japan.ORCID 0000-0002-8619-6678
Shingo SuzukiDepartment of Anatomy and Neurobiology, Faculty of Medicine, Kagawa University, Kagawa, Japan.ORCID 0000-0003-3878-1909
Anna KawaiDepartment of Anatomy and Neurobiology, Faculty of Medicine, Kagawa University, Kagawa, Japan.
Ryuichiro MiuraDepartment of Anatomy and Neurobiology, Faculty of Medicine, Kagawa University, Kagawa, Japan.
Ken-Ichi OhtaDepartment of Anatomy and Neurobiology, Faculty of Medicine, Kagawa University, Kagawa, Japan.ORCID 0000-0002-2929-6154
Takanori MikiDepartment of Anatomy and Neurobiology, Faculty of Medicine, Kagawa University, Kagawa, Japan.
Naoki AdachiDepartment of Physiology, Showa University School of Medicine, Tokyo, Japan.
Hidetada MatsuokaDepartment of Pharmaceutical Science, Yokohama University of Pharmacy, Yokohama, Japan.
Kagawa University · JPFujita Health University · JPShowa University · JPYokohama University of Pharmacy · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimChromosome 8 open reading frame 46 (C8orf46), a human protein-coding gene, has recently been named Vexin. A recent study indicated that Vexin is involved in embryonic neurogenesis. Additionally, some transcriptomic studies detected changes in the mRNA levels of patients with psychiatric and neurological diseases. In our previous study, we sought for target genes of brain-derived neurotrophic factor (BDNF) in cultured rat cortical neurons, finding that BDNF potentially leads to the upregulation of Vexin mRNA. However, its underlying mechanisms are unknown. In the present study, we assessed the regulatory mechanisms of the BDNF-induced gene expression of Vexin in vitro.

methodsWe reanalyzed ChIP-seq data in various human organs provided by the ENCODE project, evaluating acetylation levels of the 27th lysine residue of the histone H3 (H3K27ac) at the Vexin locus. The transcriptomic effects of BDNF on rat Vexin (RGD1561849) were evaluated by real-time quantitative PCR (RT-qPCR) in primary cultures of cerebral cortical neurons, in the presence or absence of inhibitors for signaling molecules activated by BDNF.

resultsThe Vexin locus and its promoter region in the brain angular gyrus show higher acetylation levels of the H3K27 than those in other organs. Stimulation of cultured rat cortical neurons, but not astrocyte, with BDNF, led to marked elevations in the mRNA levels of Vexin, which was inhibited in the presence of K252a and U0126.

conclusionThe upregulated H3K27ac in the brain may be associated with the enriched gene expression of Vexin in the brain. It is indicated that BDNF induces the gene expression of Vexin in the cortical neurons via the TrkB-MEK signaling pathway.

Indexed as

AdolescentAdultAgedAged, 80 and overAnimalsBrain-Derived Neurotrophic FactorCells, CulturedCerebral CortexChildChild, PreschoolFemaleHumansInfantInfant, NewbornMaleMiddle AgedBDNF protein, humanBrain-Derived Neurotrophic Factorbrain-derived neurotrophic factorcultured cortical neuronsH3K27acVexin

Identifiers

PMID32558188
PMCPMC7722677
OpenAlexW3035878445

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.