Evidence map›Paper›PMID 32557794›Full record

ArticleMovement disorders : official journal of the Movement Disorder Society2020

Common Variants Coregulate Expression of GBA and Modifier Genes to Delay Parkinson's Disease Onset.

William Schierding, Sophie Farrow, Tayaza Fadason, Oscar E E Graham, Toni L Pitcher, Sara Qubisi, Alan J Davidson, Jo K Perry, Tim J Anderson, Martin A Kennedy and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Movement disorders : official journal of the Movement Disorder Society, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Genetic meta-analysis of levodopa induced dyskinesia in Parkinson's disease.medRxiv : the preprint server for health sciences · 2023
    Article
  9. Article
  10. Frontiers in immunology · 2023
    Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Glucocerebrosidase Activity is not Associated with Parkinson's Disease Risk or Severity.Movement disorders : official journal of the Movement Disorder Society · 2022
    Article
  16. Intronic Haplotypes in the GBA Gene Do Not Predict Age at Diagnosis of Parkinson's Disease.Movement disorders : official journal of the Movement Disorder Society · 2021
    Article
  17. The Role of Cholesterol in α-Synuclein and Lewy Body Pathology in GBA1 Parkinson's Disease.Movement disorders : official journal of the Movement Disorder Society · 2021
    Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

William SchierdingLiggins Institute, The University of Auckland, Auckland, New Zealand.ORCID 0000-0001-5659-2701
Sophie FarrowLiggins Institute, The University of Auckland, Auckland, New Zealand.ORCID 0000-0002-6578-4219
Tayaza FadasonLiggins Institute, The University of Auckland, Auckland, New Zealand.ORCID 0000-0002-1170-7883
Oscar E E GrahamGene Structure and Function Laboratory, Department of Pathology and Biomedical Science, University of Otago, Christchurch, New Zealand.ORCID 0000-0002-6257-390X
Toni L PitcherDepartment of Medicine, University of Otago, Christchurch, New Zealand.ORCID 0000-0003-4661-5038
Sara QubisiDepartment of Molecular Medicine and Pathology, School of Medical Sciences, The University of Auckland, Auckland, New Zealand.
Alan J DavidsonDepartment of Molecular Medicine and Pathology, School of Medical Sciences, The University of Auckland, Auckland, New Zealand.ORCID 0000-0002-5732-1193
Jo K PerryLiggins Institute, The University of Auckland, Auckland, New Zealand.ORCID 0000-0002-4418-947X
Tim J AndersonDepartment of Medicine, University of Otago, Christchurch, New Zealand.ORCID 0000-0002-1116-3839
Martin A KennedyGene Structure and Function Laboratory, Department of Pathology and Biomedical Science, University of Otago, Christchurch, New Zealand.ORCID 0000-0002-6445-8526
Antony CooperAustralian Parkinsons Mission, Garvan Institute of Medical Research, Sydney, New South Wales, Australia.ORCID 0000-0002-6027-2353
Justin M O'SullivanLiggins Institute, The University of Auckland, Auckland, New Zealand.ORCID 0000-0003-2927-450X
University of Auckland · NZGarvan Institute of Medical Research · AUNew Zealand Brain Research Institute · NZUniversity of Otago · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGBA mutations are numerically the most significant genetic risk factor for Parkinson's disease (PD), yet these mutations have low penetrance, suggesting additional mechanisms.

objectivesThe objective of this study was to determine if the penetrance of GBA in PD can be explained by regulatory effects on GBA and modifier genes.

methodsGenetic variants associated with the regulation of GBA were identified by screening 128 common single nucleotide polymorphisms (SNPs) in the GBA locus for spatial cis-expression quantitative trail locus (supported by chromatin interactions).

resultsWe identified common noncoding SNPs within GBA that (1) regulate GBA expression in peripheral tissues, some of which display α-synuclein pathology and (2) coregulate potential modifier genes in the central nervous system and/or peripheral tissues. Haplotypes based on 3 of these SNPs delay disease onset by 5 years. In addition, SNPs on 6 separate chromosomes coregulate GBA expression specifically in either the substantia nigra or cortex, and their combined effect potentially modulates motor and cognitive symptoms, respectively.

conclusionsThis work provides a new perspective on the haplotype-specific effects of GBA and the genetic etiology of PD, expanding the role of GBA from the gene encoding the β-glucocerebrosidase (GCase) to that of a central regulator and modifier of PD onset, with GBA expression itself subject to distant regulation. Some idiopathic patients might possess insufficient GBA-encoded GCase activity in the substantia nigra as the result of distant regulatory variants and therefore might benefit from GBA-targeting therapeutics. The SNPs' regulatory impacts provide a plausible explanation for the variable phenotypes also observed in GBA-centric Gaucher's disease and dementia with Lewy bodies. © 2020 The Authors. Movement Disorders published by Wiley Periodicals, LLC on behalf of International Parkinson and Movement Disorder Society.

Indexed as

Gaucher DiseaseParkinson DiseaseGenes, ModifierGlucosylceramidaseHumansLewy BodiesMutationGlucosylceramidase

Identifiers

PMID32557794
PMCPMC7496525
OpenAlexW3036315503

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.