Evidence map›Paper›PMID 32557752›Full record

ArticleMagnetic resonance in medicine2020

Comparison of BOLD and CBV using 3D EPI and 3D GRASE for cortical layer functional MRI at 7 T.

Alexander J S Beckett, Tetiana Dadakova, Jennifer Townsend, Laurentius Huber, Suhyung Park, David A Feinberg

Abstract read
In one paragraph

Article in Magnetic resonance in medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Alexander J S BeckettHelen Wills Neuroscience Institute, University of California, Berkeley, California, USA.ORCID 0000-0002-7123-9559
Tetiana DadakovaHelen Wills Neuroscience Institute, University of California, Berkeley, California, USA.
Jennifer TownsendHelen Wills Neuroscience Institute, University of California, Berkeley, California, USA.
Laurentius HuberDepartment of Cognitive Neuroscience, Faculty of Psychology and Neuroscience, Maastricht University, Maastricht, the Netherlands.
Suhyung ParkHelen Wills Neuroscience Institute, University of California, Berkeley, California, USA.ORCID 0000-0002-7499-9377
David A FeinbergHelen Wills Neuroscience Institute, University of California, Berkeley, California, USA.

Funding

MRI CORTICOGRAPHY: DEVELOPING NEXT GENERATION MICROSCALE HUMAN CORTEX MRI SCANNERU01EB025162 · NIBIB · UNIVERSITY OF CALIFORNIA BERKELEY · PI FEINBERG, DAVID ALAN, LIU, CHUNLEI · 2017 to 2021
$13.4M
Foundations of MRI Corticography for mesoscale organization and neuronal circuitryR01MH111444 · NIMH · UNIVERSITY OF CALIFORNIA BERKELEY · PI FEINBERG, DAVID ALAN · 2016 to 2020
$5.1M
Improving Human fMRI through Modeling and Imaging Microvascular Dynamics: Administrative SupplementR01MH111419 · NIMH · MASSACHUSETTS GENERAL HOSPITAL · PI POLIMENI, JONATHAN RIZZO · 2016 to 2020
$4.9M
Highly Accelerated Simultaneous Multi-Slice Phase Contrast MRIR44MH112210 · NIMH · ADVANCED MRI TECHNOLOGY, LLC · PI FEINBERG, DAVID ALAN · 2016 to 2017
$2.7M
HIGHLY EFFICIENT CEREBRAL PERFUSION MRIR44NS084788 · NINDS · ADVANCED MRI TECHNOLOGY, LLC · PI FEINBERG, DAVID ALAN · 2013 to 2017
$2.5M
MRI Corticography (MRCoG): Micro-scale Human Cortical ImagingR24MH106096 · NIMH · UNIVERSITY OF CALIFORNIA BERKELEY · PI FEINBERG, DAVID ALAN, LIU, CHUNLEI · 2014 to 2016
$1.4M
NIBIB NIH HHS U01 EB025162NIMH NIH HHS R01 MH111419NIMH NIH HHS R01 MH111444NIMH NIH HHS R24 MH106096NIMH NIH HHS R44 MH112210NINDS NIH HHS R44 NS084788
6 · The paper itself

Abstract

purposeFunctional MRI (fMRI) at the mesoscale of cortical layers and columns requires both sensitivity and specificity, the latter of which can be compromised if the imaging method is affected by vascular artifacts, particularly cortical draining veins at the pial surface. Recent studies have shown that cerebral blood volume (CBV) imaging is more specific to the actual laminar locus of neural activity than BOLD imaging using standard gradient-echo EPI sequences. Gradient and spin-echo (GRASE) BOLD imaging has also shown greater specificity when compared with standard gradient-echo EPI BOLD. Here we directly compare CBV and BOLD contrasts in high-resolution imaging of the primary motor cortex for laminar functional MRI in four combinations of signal labeling, CBV using slice-selective slab-inversion vascular space occupancy (VASO) and BOLD, each with 3D gradient-echo EPI and zoomed 3D-GRASE image readouts.

methodsActivations were measured using each sequence and contrast combination during a motor task. Activation profiles across cortical depth were measured to assess the sensitivity and specificity (pial bias) of each method.

resultsBoth CBV imaging using gradient-echo 3D-EPI and BOLD imaging using 3D-GRASE show similar specificity and sensitivity and are therefore useful tools for mesoscopic functional MRI in the human cortex. The combination of GRASE and VASO did not demonstrate high levels of sensitivity, nor show increased specificity.

conclusionThree-dimensional EPI with VASO contrast and 3D-GRASE with BOLD contrast both demonstrate sufficient sensitivity and specificity for laminar functional MRI to be used by neuroscientists in a wide range of investigations of depth-dependent neural circuitry in the human brain.

Indexed as

Brain MappingCerebral Blood VolumeBrainCerebrovascular CirculationHumansImaging, Three-DimensionalMagnetic Resonance Imaging7 Teslacerebral blood volumefMRIGRASEvascular space occupancy

Identifiers

PMID32557752
PMCPMC7721980

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.