Evidence map›Paper›PMID 32556864›Full record

ArticleJournal of neuro-oncology2020

Glioblastomas located in proximity to the subventricular zone (SVZ) exhibited enrichment of gene expression profiles associated with the cancer stem cell state.

Tyler C Steed, Jeffrey M Treiber, Birra Taha, H Billur Engin, Hannah Carter, Kunal S Patel, Anders M Dale, Bob S Carter, Clark C Chen

Abstract read
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In one paragraph

Article in Journal of neuro-oncology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 34 citations in OpenAlex.

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  4. The Role of Chaf1b in Maintaining Glioma Stem Cell Stemness and Regulating Microglial Polarization.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
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  19. Glioblastoma and Methionine Addiction.International journal of molecular sciences · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 1 country.

Tyler C SteedDepartment of Neurosurgery, Emory School of Surgery, Atlanta, GA, USA.
Jeffrey M TreiberDepartment of Neurosurgery, Baylor College of Medicine, Houston, TX, USA.
Birra TahaDepartment of Neurosurgery, University of Minnesota, D429 Mayo Memorial Building, 420 Delaware St. S. E., MMC96, Minneapolis, MN, 55455, USA.
H Billur EnginDivision of Medical Genetics, Department of Medicine, University of California, La Jolla, San Diego, CA, USA.
Hannah CarterDivision of Medical Genetics, Department of Medicine, University of California, La Jolla, San Diego, CA, USA.
Kunal S PatelDepartment of Neurosurgery, University of California Los Angeles, Los Angeles, CA, USA.
Anders M DaleMultimodal Imaging Laboratory, University of California San Diego, La Jolla, San Diego, CA, USA.
Bob S CarterDepartment of Neurosurgery, Massachusetts General Hospital, Boston, MA, USA.
Clark C ChenDepartment of Neurosurgery, University of Minnesota, D429 Mayo Memorial Building, 420 Delaware St. S. E., MMC96, Minneapolis, MN, 55455, USA. ccchen@umn.edu.ORCID http://orcid.org/0000-0001-6258-9277
University of Minnesota · USBaylor College of Medicine · USEmory and Henry College · USMassachusetts General Hospital · USUniversity of California, Los Angeles · USUniversity of California San Diego · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionConflicting results have been reported in the association between glioblastoma proximity to the subventricular zone (SVZ) and enrichment of cancer stem cell properties. Here, we examined this hypothesis using magnetic resonance (MR) images derived from 217 The Cancer Imaging Archive (TCIA) glioblastoma subjects.

methodsPre-operative MR images were segmented automatically into contrast enhancing (CE) tumor volumes using Iterative Probabilistic Voxel Labeling (IPVL). Distances were calculated from the centroid of CE tumor volumes to the SVZ and correlated with gene expression profiles of the corresponding glioblastomas. Correlative analyses were performed between SVZ distance, gene expression patterns, and clinical survival.

resultsGlioblastoma located in proximity to the SVZ showed increased mRNA expression patterns associated with the cancer stem-cell state, including CD133 (P = 0.006). Consistent with the previous observations suggesting that glioblastoma stem cells exhibit increased DNA repair capacity, glioblastomas in proximity to the SVZ also showed increased expression of DNA repair genes, including MGMT (P = 0.018). Reflecting this enhanced DNA repair capacity, the genomes of glioblastomas in SVZ proximity harbored fewer single nucleotide polymorphisms relative to those located distant to the SVZ (P = 0.003). Concordant with the notion that glioblastoma stem cells are more aggressive and refractory to therapy, patients with glioblastoma in proximity to SVZ exhibited poorer progression free and overall survival (P < 0.01).

conclusionAn unbiased analysis of TCIA suggests that glioblastomas located in proximity to the SVZ exhibited mRNA expression profiles associated with stem cell properties, increased DNA repair capacity, and is associated with poor clinical survival.

Indexed as

Gene Expression Regulation, NeoplasticTranscriptomeBiomarkers, TumorBrain NeoplasmsDisease ProgressionFemaleFollow-Up StudiesGlioblastomaHumansLateral VentriclesMagnetic Resonance ImagingMaleMiddle AgedNeoplastic Stem CellsPreoperative CarePrognosisBiomarkers, Tumor

Identifiers

PMID32556864
OpenAlexW3036891640

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.