Evidence map›Paper›PMID 32555394›Full record

ArticleScientific reports2020

High frequency of intermediary alleles in the HTT gene in Northern Sweden - The Swedish Huntingtin Alleles and Phenotype (SHAPE) study.

Jimmy Sundblom, Valter Niemelä, Maria Ghazarian, Ann-Sofi Strand, Ingvar A Bergdahl, Jan-Håkan Jansson, Stefan Söderberg, Eva-Lena Stattin

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Jimmy SundblomDepartment of Neuroscience, Neurosurgery, Uppsala University, Uppsala, Sweden. jimmy.sundblom@neuro.uu.se.
Valter NiemeläDepartment of Neuroscience, Neurology, Uppsala University, Uppsala, Sweden.
Maria GhazarianDepartment of Neuroscience, Neurology, Uppsala University, Uppsala, Sweden.
Ann-Sofi StrandScience for Life Laboratory (SciLifeLab), Department of Immunology, Genetics, and Pathology, Uppsala University, Uppsala, Sweden.
Ingvar A BergdahlThe Biobank Research Unit, Umeå University, Umeå, Sweden.
Jan-Håkan JanssonDepartment of Public Health and Clinical Medicine, Research Unit Skellefteå, Umeå University, Umeå, Sweden.
Stefan SöderbergDepartment of Public Health and Clinical Medicine, Heart Centre, Umeå University, Umeå, Sweden.
Eva-Lena StattinDepartment of Immunology, Genetics and Pathology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Uppsala University · SEUmeå University · SESkellefteå Hospital · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trinucleotide (CAG) repeat expansions longer than 39 in the huntingtin (HTT) gene cause Huntington's disease (HD). The frequency of intermediate alleles (IA) with a length of 27-35 in the general population is not fully known, but studied in specific materials connected to the incidence of HD. The Swedish Huntingtin Alleles and Phenotype (SHAPE) study aims to assess the frequency of trinucleotide repeat expansions in the HTT gene in north Sweden. 8260 individuals unselected for HD from the counties of Norr- and Västerbotten in the north of Sweden were included. DNA samples were obtained and analysis of the HTT gene was performed, yielding data on HTT gene expansion length in 7379 individuals. A high frequency of intermediate alleles, 6.8%, was seen. Also, individuals with repeat numbers lower than ever previously reported (<5) were found. These results suggest a high frequency of HD in the norther parts of Sweden. Subsequent analyses may elucidate the influence of IA:s on traits other than HD.

Indexed as

Gene FrequencyPhenotypeAdultAgedFemaleHumansHuntingtin ProteinHuntington DiseaseMaleMiddle AgedSwedenTrinucleotide RepeatsHTT protein, humanHuntingtin Protein

Identifiers

PMID32555394
PMCPMC7299994
OpenAlexW3036587159

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.