Evidence map›Paper›PMID 32555263›Full record

ArticleScientific reports2020

Backbone Interactions Between Transcriptional Activator ExsA and Anti-Activator ExsD Facilitate Regulation of the Type III Secretion System in Pseudomonas aeruginosa.

Manisha Shrestha, Robert C Bernhards, Yichen Fu, Kylie Ryan, Florian D Schubot

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. The small RNA PrrH aggravatesMicrobiology spectrum · 2024
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Manisha ShresthaDepartment of Biological Sciences, Virginia Polytechnic Institute & State University, Washington Street, Blacksburg, VA, 24060, USA.
Robert C BernhardsDepartment of Biological Sciences, Virginia Polytechnic Institute & State University, Washington Street, Blacksburg, VA, 24060, USA.
Yichen FuDepartment of Biological Sciences, Virginia Polytechnic Institute & State University, Washington Street, Blacksburg, VA, 24060, USA.
Kylie RyanDepartment of Biological Sciences, Virginia Polytechnic Institute & State University, Washington Street, Blacksburg, VA, 24060, USA.
Florian D SchubotDepartment of Biological Sciences, Virginia Polytechnic Institute & State University, Washington Street, Blacksburg, VA, 24060, USA. fschubot@vt.edu.
Virginia Tech · USThe University of Texas Southwestern Medical Center · USUnited States Army Combat Capabilities Development Command · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The type III secretion system (T3SS) is a pivotal virulence mechanism of many Gram-negative bacteria. During infection, the syringe-like T3SS injects cytotoxic proteins directly into the eukaryotic host cell cytoplasm. In Pseudomonas aeruginosa, expression of the T3SS is regulated by a signaling cascade involving the proteins ExsA, ExsC, ExsD, and ExsE. The AraC-type transcription factor ExsA activates transcription of all T3SS-associated genes. Prior to host cell contact, ExsA is inhibited through direct binding of the anti-activator protein ExsD. Host cell contact triggers secretion of ExsE and sequestration of ExsD by ExsC to cause the release of ExsA. ExsA does not bind ExsD through the canonical ligand binding pocket of AraC-type proteins. Using site-directed mutagenesis and a specific in vitro transcription assay, we have now discovered that backbone interactions between the amino terminus of ExsD and the ExsA beta barrel constitute a pivotal part of the ExsD-ExsA interface. Follow-up bacterial two-hybrid experiments suggest additional contacts create an even larger protein-protein interface. The discovered role of the amino terminus of ExsD in ExsA binding explains how ExsC might relieve the ExsD-mediated inhibition of T3SS gene expression, because the same region of ExsD interacts with ExsC following host cell contact.

Indexed as

Bacterial ProteinsBinding SitesMutagenesis, Site-DirectedProtein Interaction Domains and MotifsProtein Structure, TertiaryPseudomonas aeruginosaRepressor ProteinsTrans-ActivatorsTranscription, GeneticType III Secretion SystemsVirulenceBacterial ProteinsExsA protein, Pseudomonas aeruginosaExsD protein, Pseudomonas aeruginosaRepressor ProteinsTrans-ActivatorsType III Secretion Systems

Identifiers

PMID32555263
PMCPMC7303211
OpenAlexW3036165191

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.