Evidence map›Paper›PMID 32554943›Full record

ArticleMicrobes and environments2020

Viral RNA Genomes Identified from Marine Macroalgae and a Diatom.

Yuto Chiba, Yuji Tomaru, Hiromori Shimabukuro, Kei Kimura, Miho Hirai, Yoshihiro Takaki, Daisuke Hagiwara, Takuro Nunoura, Syun-Ichi Urayama

Open access · diamondAbstract read
In one paragraph

Article in Microbes and environments, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Yuto ChibaLaboratory of Fungal Interaction and Molecular Biology (donated by IFO), Department of Life and Environmental Sciences, University of Tsukuba.
Yuji TomaruJapan Fisheries Research and Education Agency, National Research Institute of Fisheries and Environment of the Inland Sea.
Hiromori ShimabukuroJapan Fisheries Research and Education Agency, National Research Institute of Fisheries and Environment of the Inland Sea.
Kei KimuraFaculty of Agriculture, Saga University.
Miho HiraiSuper-cutting-edge Grand and Advanced Research (SUGAR) Program, JAMSTEC.
Yoshihiro TakakiSuper-cutting-edge Grand and Advanced Research (SUGAR) Program, JAMSTEC.
Daisuke HagiwaraLaboratory of Fungal Interaction and Molecular Biology (donated by IFO), Department of Life and Environmental Sciences, University of Tsukuba.
Takuro NunouraResearch Center for Bioscience and Nanoscience (CeBN), Japan Agency for Marine-Earth Science and Technology (JAMSTEC).
Syun-Ichi UrayamaLaboratory of Fungal Interaction and Molecular Biology (donated by IFO), Department of Life and Environmental Sciences, University of Tsukuba.
Japan Agency for Marine-Earth Science and Technology · JPJapan Fisheries Research and Education Agency · JPSaga University · JPUniversity of Tsukuba · JPYokohama City University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protists provide insights into the diversity and function of RNA viruses in marine systems. Among them, marine macroalgae are good targets for RNA virome analyses because they have a sufficient biomass in nature. However, RNA viruses in macroalgae have not yet been examined in detail, and only partial genome sequences have been reported for the majority of RNA viruses. Therefore, to obtain further insights into the distribution and diversity of RNA viruses associated with marine protists, we herein examined RNA viruses in macroalgae and a diatom. We report the putative complete genome sequences of six novel RNA viruses from two marine macroalgae and one diatom holobiont. Four viruses were not classified into established viral genera or families. Furthermore, a virus classified into Totiviridae showed a genome structure that has not yet been reported in this family. These results suggest that a number of distinct RNA viruses are widespread in a broad range of protists.

Indexed as

BiodiversityDiatomsDouble Stranded RNA VirusesGenome, ViralPhylogenySeawaterSeaweedViral ProteinsViromeViral ProteinsalgaedsRNARNA virus

Identifiers

PMID32554943
PMCPMC7511793
OpenAlexW3035370160

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.