Evidence map›Paper›PMID 32554506›Full record

ArticlePlant physiology2020

Chloroplast Autophagy and Ubiquitination Combine to Manage Oxidative Damage and Starvation Responses.

Yuta Kikuchi, Sakuya Nakamura, Jesse D Woodson, Hiroyuki Ishida, Qihua Ling, Jun Hidema, R Paul Jarvis, Shinya Hagihara, Masanori Izumi

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 68 citations in OpenAlex.

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  17. The Role of E3 Ubiquitin Ligases in Chloroplast Function.International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Yuta KikuchiGraduate School of Life Sciences, Tohoku University, 980-0845 Sendai, Japan.
Sakuya NakamuraCenter for Sustainable Resource Science, RIKEN, 351-0198 Wako, Japan.ORCID 0000-0002-8218-6894
Jesse D WoodsonSchool of Plant Sciences, University of Arizona, Tucson, Arizona 85721-0036.ORCID 0000-0002-5463-5146
Hiroyuki IshidaGraduate School of Agricultural Science, Tohoku University, 980-0845 Sendai, Japan.ORCID 0000-0002-8682-4566
Qihua LingDepartment of Plant Sciences, University of Oxford, Oxford OX1 3RB, United Kingdom.ORCID 0000-0002-6984-9921
Jun HidemaGraduate School of Life Sciences, Tohoku University, 980-0845 Sendai, Japan.ORCID 0000-0002-3798-8257
R Paul JarvisDepartment of Plant Sciences, University of Oxford, Oxford OX1 3RB, United Kingdom.ORCID 0000-0003-2127-5671
Shinya HagiharaCenter for Sustainable Resource Science, RIKEN, 351-0198 Wako, Japan.ORCID 0000-0003-0348-7873
Masanori IzumiCenter for Sustainable Resource Science, RIKEN, 351-0198 Wako, Japan masanori.izumi@riken.jp.ORCID 0000-0001-5222-9163
Tohoku University · JPRIKEN Center for Sustainable Resource Science · JPUniversity of Oxford · GBJapan Science and Technology Agency · JPUniversity of Arizona · US

Funding

Biotechnology and Biological Sciences Research Council BB/K018442/1Biotechnology and Biological Sciences Research Council BB/N006372/1Biotechnology and Biological Sciences Research Council BB/R009333/1Biotechnology and Biological Sciences Research Council BB/R016984/1
6 · The paper itself

Abstract

Autophagy and the ubiquitin-proteasome system are the major degradation processes for intracellular components in eukaryotes. Although ubiquitination acts as a signal inducing organelle-targeting autophagy, the interaction between ubiquitination and autophagy in chloroplast turnover has not been addressed. In this study, we found that two chloroplast-associated E3 enzymes, SUPPRESSOR OF PPI1 LOCUS1 and PLANT U-BOX4 (PUB4), are not necessary for the induction of either piecemeal autophagy of chloroplast stroma or chlorophagy of whole damaged chloroplasts in Arabidopsis (

Indexed as

ArabidopsisArabidopsis ProteinsAutophagyChloroplastsOxidative StressPlant LeavesReactive Oxygen SpeciesUbiquitinUbiquitinationArabidopsis ProteinsReactive Oxygen SpeciesUbiquitin

Identifiers

PMID32554506
PMCPMC7401110
OpenAlexW3036811453

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.