Evidence map›Paper›PMID 32554491›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

DNA-based fluorescent probes of NOS2 activity in live brains.

Aneesh T Veetil, Junyi Zou, Katharine W Henderson, Maulik S Jani, Shabana M Shaik, Sangram S Sisodia, Melina E Hale, Yamuna Krishnan

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Quantitative Chemical Imaging of Organelles.Accounts of chemical research · 2024
    Article
  5. Article
  6. Review
  7. mRNA vaccines in disease prevention and treatment.Signal transduction and targeted therapy · 2023
    Review
  8. Rationalizing the environment-dependent photophysical behavior of a DNA luminescent probe by classical and non-adiabatic molecular dynamics simulations.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2023
    Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Tubular lysosomes harbor active ion gradients and poise macrophages for phagocytosis.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Review
  19. Article
  20. Quantitative Imaging of BiochemistryACS central science · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Aneesh T VeetilDepartment of Chemistry, University of Chicago, Chicago, IL 60637.
Junyi ZouDepartment of Chemistry, University of Chicago, Chicago, IL 60637.
Katharine W HendersonDepartment of Organismal Biology and Anatomy, University of Chicago, Chicago, IL 60637.ORCID 0000-0001-6042-4452
Maulik S JaniDepartment of Chemistry, University of Chicago, Chicago, IL 60637.
Shabana M ShaikDepartment of Neurobiology, University of Chicago, Chicago, IL 60637.ORCID 0000-0001-7133-5754
Sangram S SisodiaDepartment of Neurobiology, University of Chicago, Chicago, IL 60637.
Melina E HaleGrossman Institute of Neuroscience, Quantitative Biology and Human Behavior, University of Chicago, Chicago, IL 60637.ORCID 0000-0001-5194-1220
Yamuna KrishnanDepartment of Chemistry, University of Chicago, Chicago, IL 60637; yamuna@uchicago.edu.ORCID 0000-0001-5282-8852
University of Chicago · US

Funding

ULTRASTRUCTURE AND CYTOMORPHOLOGY COREP30DK042086 · NIDDK · UNIVERSITY OF CHICAGO · PI LIU, CAMBRIAN YANGSHAO · 1990 to 2025
$29.8M
NIDDK NIH HHS P30 DK042086
6 · The paper itself

Abstract

Innate immune cells destroy pathogens within a transient organelle called the phagosome. When pathogen-associated molecular patterns (PAMPs) displayed on the pathogen are recognized by Toll-like receptors (TLRs) on the host cell, it activates inducible nitric oxide synthase (NOS2) which instantly fills the phagosome with nitric oxide (NO) to clear the pathogen. Selected pathogens avoid activating NOS2 by concealing key PAMPs from their cognate TLRs. Thus, the ability to map NOS2 activity triggered by PAMPs can reveal critical mechanisms underlying pathogen susceptibility. Here, we describe DNA-based probes that ratiometrically report phagosomal and endosomal NO, and can be molecularly programmed to display precise stoichiometries of any desired PAMP. By mapping phagosomal NO produced in microglia of live zebrafish brains, we found that single-stranded RNA of bacterial origin acts as a PAMP and activates NOS2 by engaging TLR-7. This technology can be applied to study PAMP-TLR interactions in diverse organisms.

Indexed as

Nitric Oxide Synthase Type IIAnimalsBrainBrain ChemistryDNAFluorescent DyesGene Knockout TechniquesMiceMicrogliaMicroscopy, FluorescenceMolecular ProbesPhagosomesZebrafishDNAFluorescent DyesMolecular ProbesNitric Oxide Synthase Type IIlive imagingmicroglianitric oxidenitric oxide synthase-2 (NOS2)phagosome

Identifiers

PMID32554491
PMCPMC7334527
OpenAlexW3036806442

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.