Evidence map›Paper›PMID 32554042›Full record

ArticleKidney international2020

Common risk variants in NPHS1 and TNFSF15 are associated with childhood steroid-sensitive nephrotic syndrome.

Xiaoyuan Jia, Tomohiko Yamamura, Rasheed Gbadegesin, Michelle T McNulty, Kyuyong Song, China Nagano, Yuki Hitomi, Dongwon Lee, Yoshihiro Aiba, Seik-Soon Khor and 39 more

Open access · hybridAbstract read
In one paragraph

Article in Kidney international, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 2 pooled it
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 2 syntheses or guidelines pooled it, 65 citations in OpenAlex.

  1. Pooled it
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  3. Article
  4. Novel immune-related susceptibility loci associated with pediatric steroid-sensitive nephrotic syndrome identified by a transethnic genome-wide association study.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2026
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  18. Common Risk Variants inKidney international reports · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

49 authors at 20 institutions in 6 countries.

Xiaoyuan JiaDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Tomohiko YamamuraDepartment of Pediatrics, Kobe University Graduate School of Medicine, Kobe, Japan.
Rasheed GbadegesinDepartment of Pediatrics, Division of Nephrology, Duke University Medical Center, Durham, North Carolina, USA.
Michelle T McNultyDepartment of Medicine-Nephrology, Boston Children's Hospital, Boston, Massachussetts, USA; Medical and Population Genetics, Broad Institute, Cambridge, Massachussetts, USA.
Kyuyong SongDepartment of Biochemistry and Molecular Biology, University of Ulsan College of Medicine, Seoul, Korea.
China NaganoDepartment of Pediatrics, Kobe University Graduate School of Medicine, Kobe, Japan.
Yuki HitomiDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Dongwon LeeDepartment of Medicine-Nephrology, Boston Children's Hospital, Boston, Massachussetts, USA; Medical and Population Genetics, Broad Institute, Cambridge, Massachussetts, USA; Harvard Medical School, Boston, Massachussetts, USA.
Yoshihiro AibaClinical Research Center, National Hospital Organization Nagasaki Medical Center, Omura, Japan.
Seik-Soon KhorDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Kazuko UenoDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Yosuke KawaiDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Masao NagasakiDepartment of Integrative Genomics, Tohoku Medical Megabank Organization, Tohoku University, Sendai, Japan.
Eisei NoiriDepartment of Hemodialysis and Apheresis, The University of Tokyo Hospital, Tokyo, Japan.
Tomoko HorinouchiDepartment of Pediatrics, Kobe University Graduate School of Medicine, Kobe, Japan.
Hiroshi KaitoDepartment of Pediatrics, Kobe University Graduate School of Medicine, Kobe, Japan; Department of Nephrology, Hyogo Prefectural Kobe Children's Hospital, Kobe, Japan.
Riku HamadaDepartment of Nephrology, Tokyo Metropolitan Children's Medical Center, Tokyo, Japan.
Takayuki OkamotoDepartment of Pediatrics, Hokkaido University Hospital, Sapporo, Japan.
Koichi KameiDivision of Nephrology and Rheumatology, National Center for Child Health and Development, Tokyo, Japan.
Yoshitsugu KakuDepartment of Nephrology, Fukuoka Children's Hospital, Fukuoka, Japan.
Rika FujimaruDepartment of Pediatrics, Osaka City General Hospital, Osaka, Japan.
Ryojiro TanakaDepartment of Nephrology, Hyogo Prefectural Kobe Children's Hospital, Kobe, Japan.
Yuko ShimaDepartment of Pediatrics, Wakayama Medical University, Wakayama, Japan.
Research Consortium on Genetics of Childhood Idiopathic Nephrotic Syndrome in Japan
Jiwon BaekDepartment of Biochemistry and Molecular Biology, University of Ulsan College of Medicine, Seoul, Korea.
Hee Gyung KangDepartment of Pediatrics, Seoul National University Children's Hospital, Seoul, Korea.
Il-Soo HaDepartment of Pediatrics, Seoul National University Children's Hospital, Seoul, Korea.
Kyoung Hee HanDepartment of Pediatrics, Jeju National University School of Medicine, Jeju, Korea.
Eun Mi YangDepartment of Pediatrics, Chonnam National University Children's Hospital, Gwangju, Korea.
Korean Consortium of Hereditary Renal Diseases in Children
Asiri AbeyagunawardenaDepartment of Pediatrics, Division of Nephrology, Duke University Medical Center, Durham, North Carolina, USA.
Brandon LaneDepartment of Pediatrics, Division of Nephrology, Duke University Medical Center, Durham, North Carolina, USA.
Megan Chryst-StanglDepartment of Pediatrics, Division of Nephrology, Duke University Medical Center, Durham, North Carolina, USA.
Christopher EsezoborDepartment of Paediatrics, College of Medicine, University of Lagos, Lagos, Nigeria.
Adaobi SolarinDepartment of Pediatrics, Lagos State University Teaching Hospital, Ikeja, Nigeria.
Midwest Pediatric Nephrology Consortium (Genetics of Nephrotic Syndrome Study Group)
Claire DossierDepartment of Paediatric Nephrology, Public Assistance Hospital of Paris, Robert-Debré Hospital, Paris, France.
Georges DeschênesCenter of Research on Inflammation, Institut National de la Santé et de la Recherche Médicale UMR 1149, University Sorbonne-Paris, Paris, France.
NEPHROVIR
Marina VivarelliDivision of Nephrology and Dialysis, Bambino Gesù Children's Hospital and Research Institute, Rome, Italy.
Hanna DebiecSorbonne University, INSERM UMR_S1155, and Nephrology Day Hospital, Department of Nephrology, Hôpital Tenon, Paris France.
Kenji IshikuraDivision of Nephrology and Rheumatology, National Center for Child Health and Development, Tokyo, Japan.
Masafumi MatsuoResearch Center for Locomotion Biology, Kobe Gakuin University, Kobe, Japan; KNC Department of Nucleic Acid Drug Discovery, Faculty of Rehabilitation, Kobe Gakuin University, Kobe, Japan.
Kandai NozuDepartment of Pediatrics, Kobe University Graduate School of Medicine, Kobe, Japan.
Pierre RoncoSorbonne University, INSERM UMR_S1155, and Nephrology Day Hospital, Department of Nephrology, Hôpital Tenon, Paris France.
Hae Il CheongDepartment of Pediatrics, Seoul National University Children's Hospital, Seoul, Korea.
Matthew G SampsonDepartment of Medicine-Nephrology, Boston Children's Hospital, Boston, Massachussetts, USA; Medical and Population Genetics, Broad Institute, Cambridge, Massachussetts, USA; Harvard Medical School, Boston, Massachussetts, USA.
Katsushi TokunagaDepartment of Human Genetics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan. Electronic address: katokunaga@ri.ncgm.go.jp.
Kazumoto IijimaDepartment of Pediatrics, Kobe University Graduate School of Medicine, Kobe, Japan. Electronic address: iijima@med.kobe-u.ac.jp.
Tohoku University · JPKobe University · JPSeoul National University Children's Hospital · KRKobe Children's Hospital · JPThe University of Tokyo · JPNational Center For Child Health and Development · JPDuke Medical Center · USInserm · FRChonnam National University Hospital · KRBroad Institute · USJeju National University · KRTokyo Metropolitan Children's Medical Center · JPWakayama Medical University · JPFukuoka Children's Hospital and Medical Center for Infectious Diseases · JPHokkaido University Hospital · JPOsaka City General Hospital · JPUlsan College · KRBambino Gesù Children's Hospital · ITCentre de Recherche sur l'Inflammation · FRHôpital Robert-Debré · FR

Funding

Training Program in Clinical & Translationa Research in Human Glomerular DiseaseU54DK083912 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KRETZLER, MATTHIAS · 2009 to 2023
$20.3M
APOL1 - associated nephropathy from human-derived, intrarenal perspectiveR01DK108805 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MATTHEW Gordon SAMPSON, Simone Sanna-Cherchi · 2016 to 2026
$3.4M
Gene Discovery in Autosomal Dominant Focal Segmental GlomerulosclerosisR01DK094987 · NIDDK · DUKE UNIVERSITY · PI GBADEGESIN, RASHEED ADEBAYO · 2012 to 2016
$2.5M
Functional and Phenotypic Characterization of a New FSGS GeneR01DK098135 · NIDDK · DUKE UNIVERSITY · PI GBADEGESIN, RASHEED ADEBAYO · 2014 to 2018
$1.8M
NIDDK NIH HHS R01 DK094987NIDDK NIH HHS R01 DK098135NIDDK NIH HHS R01 DK108805NIDDK NIH HHS U54 DK083912
6 · The paper itself

Abstract

To understand the genetics of steroid-sensitive nephrotic syndrome (SSNS), we conducted a genome-wide association study in 987 childhood SSNS patients and 3,206 healthy controls with Japanese ancestry. Beyond known associations in the HLA-DR/DQ region, common variants in NPHS1-KIRREL2 (rs56117924, P=4.94E-20, odds ratio (OR) =1.90) and TNFSF15 (rs6478109, P=2.54E-8, OR=0.72) regions achieved genome-wide significance and were replicated in Korean, South Asian and African populations. Trans-ethnic meta-analyses including Japanese, Korean, South Asian, African, European, Hispanic and Maghrebian populations confirmed the significant associations of variants in NPHS1-KIRREL2 (P

Indexed as

Nephrotic SyndromeAllelesChildGenome-Wide Association StudyHaplotypesHumansMembrane ProteinsMutationSteroidsTumor Necrosis Factor Ligand Superfamily Member 15Membrane ProteinsnephrinSteroidsTNFSF15 protein, humanTumor Necrosis Factor Ligand Superfamily Member 15glomerulusnephrotic syndromepediatric nephrologypodocyte

Identifiers

PMID32554042
PMCPMC8101291
OpenAlexW3034638407

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.