Evidence map›Paper›PMID 32553663›Full record

ArticleToxicology in vitro : an international journal published in association with BIBRA2020

An integrated chemical environment with tools for chemical safety testing.

Shannon Bell, Jaleh Abedini, Patricia Ceger, Xiaoqing Chang, Bethany Cook, Agnes L Karmaus, Isabel Lea, Kamel Mansouri, Jason Phillips, Eric McAfee and 7 more

Abstract read
In one paragraph

Article in Toxicology in vitro : an international journal published in association with BIBRA, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Review
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  8. Synergistic toxicity in alcohol-associated liver disease and PFAS exposure.Toxicological sciences : an official journal of the Society of Toxicology · 2025
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Advancing Toxicity Predictions: A Review onEnvironment & health (Washington, D.C.) · 2024
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Shannon BellIntegrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA. Electronic address: sbell@ils-inc.com.
Jaleh AbediniIntegrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA. Electronic address: jabedini@ils-inc.com.
Patricia CegerIntegrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA. Electronic address: pceger1@ils-inc.com.
Xiaoqing ChangIntegrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA. Electronic address: xchang@ils-inc.com.
Bethany CookIntegrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA. Electronic address: bcook@ils-inc.com.
Agnes L KarmausIntegrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA. Electronic address: akarmaus@ils-inc.com.
Isabel LeaIntegrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA. Electronic address: ilea@toxstrategies.com.
Kamel MansouriIntegrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA.
Jason PhillipsSciome LLC, 2 Davis Dr., Research Triangle Park, NC 27709, USA. Electronic address: Jason.phillips@sciome.com.
Eric McAfeeSciome LLC, 2 Davis Dr., Research Triangle Park, NC 27709, USA. Electronic address: eric.mcafee@sciome.com.
Ruhi RaiIntegrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA. Electronic address: rrai@g1therapeutics.com.
John RooneyIntegrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA. Electronic address: jrooney@ils-inc.com.
Catherine SprankleIntegrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA. Electronic address: csprankle@ils-inc.com.
Arpit TandonSciome LLC, 2 Davis Dr., Research Triangle Park, NC 27709, USA. Electronic address: arpit.tandon@sciome.com.
David AllenIntegrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA. Electronic address: dallen@ils-inc.com.
Warren CaseyNational Toxicology Program Interagency Center for the Evaluation of Alternative Toxicological Methods, National Institute of Environmental Health Sciences, P.O. Box 12233, Research Triangle Park, NC 27709, USA. Electronic address: warren.casey@nih.gov.
Nicole KleinstreuerNational Toxicology Program Interagency Center for the Evaluation of Alternative Toxicological Methods, National Institute of Environmental Health Sciences, P.O. Box 12233, Research Triangle Park, NC 27709, USA. Electronic address: nicole.kleinstreuer@nih.gov.

Funding

Intramural NIH HHS Z99 ES999999NIEHS NIH HHS HHSN273201500010C
6 · The paper itself

Abstract

Moving toward species-relevant chemical safety assessments and away from animal testing requires access to reliable data to develop and build confidence in new approaches. The Integrated Chemical Environment (ICE) provides tools and curated data centered around chemical safety assessment. This article describes updates to ICE, including improved accessibility and interpretability of in vitro data via mechanistic target mapping and enhanced interactive tools for in vitro to in vivo extrapolation (IVIVE). Mapping of in vitro assay targets to toxicity endpoints of regulatory importance uses literature-based mode-of-action information and controlled terminology from existing knowledge organization systems to support data interoperability with external resources. The most recent ICE update includes Tox21 high-throughput screening data curated using analytical chemistry data and assay-specific parameters to eliminate potential artifacts or unreliable activity. Also included are physicochemical/ADME parameters for over 800,000 chemicals predicted by quantitative structure-activity relationship models. These parameters are used by the new ICE IVIVE tool in combination with the U.S. Environmental Protection Agency's httk R package to estimate in vivo exposures corresponding to in vitro bioactivity concentrations from stored or user-defined assay data. These new ICE features allow users to explore the applications of an expanded data space and facilitate building confidence in non-animal approaches.

Indexed as

Chemical SafetyRisk AssessmentAnimalsAnimal Testing AlternativesDatabases, FactualHigh-Throughput Screening AssaysHumansToxicity TestsIVIVENon-animal methodsRegulatory toxicology

Identifiers

PMID32553663
PMCPMC7393692

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.