Evidence map›Paper›PMID 32553119›Full record

ArticleCell chemical biology2020

tRNA

Irem Avcilar-Kucukgoze, Howard Gamper, Christine Polte, Zoya Ignatova, Ralph Kraetzner, Michael Shtutman, Ya-Ming Hou, Dawei W Dong, Anna Kashina

Open access · bronzeAbstract read
In one paragraph

Article in Cell chemical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 29 citations in OpenAlex.

  1. Tracing the mark of arginine.Nature chemical biology · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Enzymatic Aminoacylation of tRNAMethods in molecular biology (Clifton, N.J.) · 2023
    Article
  11. Article
  12. Synthesis of Peptides and Proteins with Site-Specific Glutamate Arginylation.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  13. Synthesis of Stably Charged Arg-tRNAMethods in molecular biology (Clifton, N.J.) · 2023
    Article
  14. Article
  15. Article
  16. Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  17. Structural basis for impaired 5' processing of a mutant tRNA associated with defects in neuronal homeostasis.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Irem Avcilar-KucukgozeDepartment of Biomedical Sciences, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Howard GamperDepartment of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA 19144, USA.
Christine PolteInstitute of Biochemistry and Molecular Biology, University of Hamburg, 20148 Hamburg, Germany.
Zoya IgnatovaInstitute of Biochemistry and Molecular Biology, University of Hamburg, 20148 Hamburg, Germany.
Ralph KraetznerDepartment of Pediatrics and Adolescent Medicine, University Medical Center Göttingen, 37075 Göttingen, Germany.
Michael ShtutmanDepartment of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29208, USA.
Ya-Ming HouDepartment of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA 19144, USA.
Dawei W DongDepartment of Biomedical Sciences, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Institute for Biomedical Informatics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Anna KashinaDepartment of Biomedical Sciences, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA. Electronic address: akashina@upenn.edu.
University of Pennsylvania · USThomas Jefferson University · USUniversität Hamburg · DEUniversitätsmedizin Göttingen · DEUniversity of South Carolina · US

Funding

Targeting NMDA Receptors and Brain Estradiol to Rescue Memory in Aging FemalesP20GM109091 · NIGMS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI RONINSON, IGOR B · 2014 to 2024
$25.2M
Regulation of cell migration by nucleotide coding sequence and arginylationR35GM122505 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI Anna S Kashina · 2017 to 2026
$6.2M
tRNA in codon usageR35GM134931 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI HOU, YA-MING · 2020 to 2025
$5.4M
Role of arginylation in prevention of alpha synuclein-driven neurodegenerationR01NS102435 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI KASHINA, ANNA S · 2019 to 2023
$2.6M
Discovery of Gram-negative permeable chemical probes for tRNA methylationR01AI139202 · NIAID · THOMAS JEFFERSON UNIVERSITY · PI HOU, YA-MING · 2019 to 2022
$2.4M
Probe discovery for tRNA methylationR01GM126210 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI HOU, YA-MING, SMITH, LAYTON HARRIS · 2018 to 2020
$1.2M
Mining the tRNA genome by live-cell imagingR21HG010824 · NHGRI · THOMAS JEFFERSON UNIVERSITY · PI AHERN, CHRISTOPHER A, HOU, YA-MING · 2019 to 2020
$441k
Impact of Dead Box RNA Helicase 3 signaling on HIV-1 Tat- and cocaine-induced neurotoxicityR21DA047936 · NIDA · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI SHTUTMAN, MICHAEL, WYATT, MICHAEL D. · 2019 to 2020
$408k
NHGRI NIH HHS R21 HG010824NIAID NIH HHS R01 AI139202NIDA NIH HHS R21 DA047936NIGMS NIH HHS P20 GM109091NIGMS NIH HHS R01 GM126210NIGMS NIH HHS R35 GM122505NIGMS NIH HHS R35 GM134931NINDS NIH HHS R01 NS102435
6 · The paper itself

Abstract

Arginyltransferase ATE1 mediates posttranslational arginylation and plays key roles in multiple physiological processes. ATE1 utilizes arginyl (Arg)-tRNA

Indexed as

AminoacyltransferasesAngiotensin IIAnimalsArginineCell LineHumansMiceProtein BindingProtein Processing, Post-TranslationalRNA, Transfer, ArgSubstrate SpecificityAminoacyltransferasesAngiotensin IIArginineAte1 protein, mouseRNA, Transfer, ArgarginylationtRFtRNA

Identifiers

PMID32553119
PMCPMC7409373
OpenAlexW3035539195

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.