Article in Gene: X, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.
0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
2 · The registry
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
3 · Its place in the literature
Who cites it
1 citing paper in PubMed, 3 citations in OpenAlex.
Yao LuCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, Liaoning, PR China.
Qilong LiCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, Liaoning, PR China.
Kexin ZhengCollege of Food Science and Technology, Shenyang Agricultural University, Shenyang, Liaoning, PR China.
Chenghao FuCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, Liaoning, PR China.
Chunying JiangCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, Liaoning, PR China.
Dayu ZhouCollege of Food Science and Technology, Shenyang Agricultural University, Shenyang, Liaoning, PR China.
Chao XiaCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, Liaoning, PR China.
Shiliang MaCollege of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang, Liaoning, PR China.
Shenyang Agricultural University · CN
Funding
No grant is acknowledged in the PubMed record.
6 · The paper itself
Abstract
In metazoan genome, the mechanism of gene expression regulation between transcriptional regulatory elements and their target gene is spatiotemporal. Active promoters possess many specific chromosomal features, such as hypersensitive to DNaseI and enrichment of specific histone modifications. In this article, we proposed a novel method which possesses a high efficiency to find promoters
Indexed as
ATAC-seq, Assay for transposase-accessible chromatin using sequencingBioinformaticsCAGE, cap analysis of gene expressionCancer-specific promoterChIP-seq, Chromatin immunoprecipitation followed by massively parallel DNA sequencingCMV, CytomegalovirusCt, thresholdDHS, DNaseI hypersensitive sitesDNase-seq, DNase I hypersensitive sites sequencingdNTPs, deoxy-ribonucleoside triphosphateEF1a1, eukaryotic translation elongation factor 1 alpha 1eRNAs, enhancer RNAsFBS, fetal bovine serumGene expression regulationGene findingGRO-seq, global run-on sequencingH3K4me3, histone H3 lysine 4 trimethylationItpr2, inositol 1, 4, 5-triphosphate receptor 2LSINCT5, long stress-induced non-coding transcript 5MCS, multiple cloning siteMouse breast cancerMPRA, Massively parallel reporter assaysmSEAP, mouse synthetic secreted embryonic alkaline phosphatasePBS, phosphate buffered solutionpNPP, p-nitropheny-phosatePromoter trapqRT-PCR, quantitative RT-PCRRNA-seq, RNA sequencingSD, standard deviationSTARR-seq, Self-transcribing active regulatory region sequencingTFs, transcription factorstpk1, thiamine pyrophosphokinaseTSS, transcription start sites
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.
Development of a high efficient promoter finding method based on transient transfection. · full record | OpenQuestion