Evidence map›Paper›PMID 32549408›Full record

ArticleInternational journal of molecular sciences2020

Mining for Candidate Genes Controlling Secondary Growth of the Carrot Storage Root.

Alicja Macko-Podgórni, Katarzyna Stelmach, Kornelia Kwolek, Gabriela Machaj, Shelby Ellison, Douglas A Senalik, Philipp W Simon, Dariusz Grzebelus

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Morphological characterizations of parsnip (Food science & nutrition · 2023
    Article
  5. Article
  6. Article
  7. Functional Genomics for Plant Breeding.International journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Alicja Macko-PodgórniDepartment of Plant Biology and Biotechnology, University of Agriculture in Krakow, 31-120 Krakow, Poland.ORCID 0000-0003-2416-2808
Katarzyna StelmachDepartment of Plant Biology and Biotechnology, University of Agriculture in Krakow, 31-120 Krakow, Poland.
Kornelia KwolekDepartment of Plant Biology and Biotechnology, University of Agriculture in Krakow, 31-120 Krakow, Poland.
Gabriela MachajDepartment of Plant Biology and Biotechnology, University of Agriculture in Krakow, 31-120 Krakow, Poland.
Shelby EllisonDepartment of Horticulture, University of Wisconsin-Madison, Madison, WI 53706, USA.
Douglas A SenalikUSDA ARS Vegetable Crops Research Unit, University of Wisconsin-Madison, Madison, WI 53706, USA.ORCID 0000-0001-8526-0554
Philipp W SimonUSDA ARS Vegetable Crops Research Unit, University of Wisconsin-Madison, Madison, WI 53706, USA.
Dariusz GrzebelusDepartment of Plant Biology and Biotechnology, University of Agriculture in Krakow, 31-120 Krakow, Poland.ORCID 0000-0001-6999-913X
University of Agriculture in Krakow · PLUniversity of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDiverse groups of carrot cultivars have been developed to meet consumer demands and industry needs. Varietal groups of the cultivated carrot are defined based on the shape of roots. However, little is known about the genetic basis of root shape determination.

methodsHere, we used 307 carrot plants from 103 open-pollinated cultivars for a genome wide association study to identify genomic regions associated with the storage root morphology.

resultsA 180 kb-long region on carrot chromosome 1 explained 10% of the total observed phenotypic variance in the shoulder diameter. Within that region,

conclusionsWe provided evidence for a likely involvement of

Indexed as

Chromosome MappingComputational BiologyDatabases, GeneticData MiningDaucus carotaGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantPlant ProteinsPlant RootsPolymorphism, Single NucleotidePlant Proteinsassociation mappingBTAF1Daucus carotaDCAF1root shapestorage root

Identifiers

PMID32549408
PMCPMC7352697
OpenAlexW3034282188

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.