Evidence map›Paper›PMID 32548287›Full record

ArticleTomography (Ann Arbor, Mich.)2020

Stanford DRO Toolkit: Digital Reference Objects for Standardization of Radiomic Features.

Akshay Jaggi, Sarah A Mattonen, Michael McNitt-Gray, Sandy Napel

Abstract read
In one paragraph

Article in Tomography (Ann Arbor, Mich.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Radiomics: a primer on high-throughput image phenotyping.Abdominal radiology (New York) · 2022
    Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Akshay JaggiDepartment of Radiology, Stanford University, Stanford, CA.
Sarah A MattonenDepartment of Radiology, Stanford University, Stanford, CA.
Michael McNitt-GrayDepartment of Radiology, University of California, Los Angeles, Los Angeles, CA.
Sandy NapelDepartment of Radiology, Stanford University, Stanford, CA.

Funding

Computing, Optimizing, and Evaluating Quantitative Cancer Imaging BiomarkersU01CA187947 · NCI · STANFORD UNIVERSITY · PI NAPEL, SANDY A., RUBIN, DANIEL L · 2015 to 2019
$2.9M
Quantitative CT Imaging for Response Assessment when using Dose Reduction MethodsU01CA181156 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BROWN, MATTHEW S, GOLDIN, JONATHAN G · 2014 to 2016
$1.1M
NCI NIH HHS U01 CA181156NCI NIH HHS U01 CA187947
6 · The paper itself

Abstract

Several institutions have developed image feature extraction software to compute quantitative descriptors of medical images for radiomics analyses. With radiomics increasingly proposed for use in research and clinical contexts, new techniques are necessary for standardizing and replicating radiomics findings across software implementations. We have developed a software toolkit for the creation of 3D digital reference objects with customizable size, shape, intensity, texture, and margin sharpness values. Using user-supplied input parameters, these objects are defined mathematically as continuous functions, discretized, and then saved as DICOM objects. Here, we present the definition of these objects, parameterized derivations of a subset of their radiomics values, computer code for object generation, example use cases, and a user-downloadable sample collection used for the examples cited in this paper.

Indexed as

Image Processing, Computer-AssistedRadiometrySoftwareReference Standardsphantomsquantitative imagingradiologyRadiomicsstandardization

Identifiers

PMID32548287
PMCPMC7289253

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.