Evidence map›Paper›PMID 32547966›Full record

ArticleFrontiers in cellular and infection microbiology2020

IgM Antibody Repertoire Fingerprints in Mice Are Personalized but Robust to Viral Infection Status.

Alexander Yermanos, Nike Julia Kräutler, Alessandro Pedrioli, Ulrike Menzel, Victor Greiff, Tanja Stadler, Annette Oxenius, Sai T Reddy

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Alexander YermanosInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.
Nike Julia KräutlerInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.
Alessandro PedrioliInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.
Ulrike MenzelDepartment of Biosystems and Engineering, ETH Zurich, Basel, Switzerland.
Victor GreiffDepartment of Immunology, University of Oslo, Oslo, Norway.
Tanja StadlerDepartment of Biosystems and Engineering, ETH Zurich, Basel, Switzerland.
Annette OxeniusInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.
Sai T ReddyDepartment of Biosystems and Engineering, ETH Zurich, Basel, Switzerland.
ETH Zurich · CHUniversity of Oslo · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antibody repertoire sequencing provides a molecular fingerprint of current and past pathogens encountered by the immune system. Most repertoire studies in humans require measuring the B cell response in the blood, resulting in a large bias to the IgM isotype. The extent to which the circulating IgM antibody repertoire correlates to lymphoid tissue-resident B cells in the setting of viral infection remains largely uncharacterized. Therefore, we compared the IgM repertoires from both blood and bone marrow (BM) plasma cells (PCs) following acute or chronic lymphocytic choriomeningitis virus (LCMV) infection in mice. Despite previously reported serum alterations between acute and chronic infection, IgM repertoire signatures based on clonal diversity metrics, public clones, network, and phylogenetic analysis were largely unable to distinguish infection cohorts. Our findings, however, revealed mouse-specific repertoire fingerprints between the blood and PC repertoires irrespective of infection status.

Indexed as

Lymphocytic ChoriomeningitisAnimalsBone MarrowImmunoglobulin MLymphocytic choriomeningitis virusMiceMice, Inbred C57BLPhylogenyImmunoglobulin Madaptive immune receptor repertoire sequencingantibody repertoireB celldeep sequencingLCMV (lymphocytic choriomeningitis virus)viral infection

Identifiers

PMID32547966
PMCPMC7270205
OpenAlexW3030435636

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.