Evidence map›Paper›PMID 32546482›Full record

ReviewThe Journal of biological chemistry2020

Viperin: An ancient radical SAM enzyme finds its place in modern cellular metabolism and innate immunity.

Soumi Ghosh, E Neil G Marsh

Open access · hybridAbstract readReview
In one paragraph

Review in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 106 citations in OpenAlex.

  1. Article
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  3. Review
  4. Article
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  7. Article
  8. Review
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  10. Article
  11. Article
  12. Review
  13. Viperin and Its Effect on SVCV Replication in Common Carp,Animals : an open access journal from MDPI · 2025
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. The functional role of CST1 and CCL26 in asthma development.Immunity, inflammation and disease · 2024
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Soumi GhoshDepartment of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.ORCID 0000-0001-6101-0147
E Neil G MarshDepartment of Chemistry, University of Michigan, Ann Arbor, Michigan, USA nmarsh@umich.edu.ORCID 0000-0003-1713-1683
Massachusetts Institute of Technology · USUniversity of Michigan · US

Funding

Understanding hydrogen atom transfer reactions in enzymesR01GM093088 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MARSH, E NEIL · 2010 to 2023
$3.5M
NIGMS NIH HHS R01 GM093088
6 · The paper itself

Abstract

Viperin plays an important and multifaceted role in the innate immune response to viral infection. Viperin is also notable as one of very few radical SAM-dependent enzymes present in higher animals; however, the enzyme appears broadly conserved across all kingdoms of life, which suggests that it represents an ancient defense mechanism against viral infections. Although viperin was discovered some 20 years ago, only recently was the enzyme's structure determined and its catalytic activity elucidated. The enzyme converts CTP to 3'-deoxy-3',4'-didehydro-CTP, which functions as novel chain-terminating antiviral nucleotide when misincorporated by viral RNA-dependent RNA polymerases. Moreover, in higher animals, viperin interacts with numerous other host and viral proteins, and it is apparent that this complex network of interactions constitutes another important aspect of the protein's antiviral activity. An emerging theme is that viperin appears to facilitate ubiquitin-dependent proteasomal degradation of some of the proteins it interacts with. Viperin-targeted protein degradation contributes to the antiviral response either by down-regulating various metabolic pathways important for viral replication or by directly targeting viral proteins for degradation. Here, we review recent advances in our understanding of the structure and catalytic activity of viperin, together with studies investigating the interactions between viperin and its target proteins. These studies have provided detailed insights into the biochemical processes underpinning this unusual enzyme's wide-ranging antiviral activity. We also highlight recent intriguing reports that implicate a broader role for viperin in regulating nonpathological cellular processes, including thermogenesis and protein secretion.

Indexed as

Immunity, InnateAnimalsHumansModels, MolecularOxidoreductases Acting on CH-CH Group DonorsProtein ConformationProteinsViperin ProteinVirus DiseasesVirusesOxidoreductases Acting on CH-CH Group DonorsProteinsRSAD2 protein, humanViperin Protein3′,4′-didehydro-3′-deoxy-CTPantiviral agentenzyme mechanisminnate immune signalinginnate immunitylipid metabolismprotein degradationprotein secretionprotein ubiquitinationradical SAM enzymeRNA-dependent RNA polymerase (RdRp)thermogenesisubiquitylation (ubiquitination)viperinviral replicationvirus

Identifiers

PMID32546482
PMCPMC7450102
OpenAlexW3034546258

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.