Evidence map›Paper›PMID 32545848›Full record

ArticleInternational journal of molecular sciences2020

An Integrative Synthetic Biology Approach to Interrogating Cellular Ubiquitin and Ufm Signaling.

Chuanyin Li, Tianting Han, Rong Guo, Peng Chen, Chao Peng, Gali Prag, Ronggui Hu

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 24 citations in OpenAlex.

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  19. A Novel Loss-of-FunctionFrontiers in genetics · 2021
    Article
  20. Demethylation ofOncology letters · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Chuanyin LiState Key Laboratory of Molecular Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences, Shanghai 200031, China.
Tianting HanState Key Laboratory of Molecular Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences, Shanghai 200031, China.
Rong GuoState Key Laboratory of Molecular Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences, Shanghai 200031, China.
Peng ChenState Key Laboratory of Molecular Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences, Shanghai 200031, China.
Chao PengUniversity of Chinese Academy of Sciences, Beijing 100049, China.ORCID 0000-0002-6814-2676
Gali PragThe Department of Biochemistry and Molecular Biology, School of Neurobiology, Biochemistry and Biophysics, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel.
Ronggui HuState Key Laboratory of Molecular Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences, Shanghai 200031, China.
Chinese Academy of Sciences · CNShanghai Advanced Research Institute · CNTel Aviv University · ILTongji University · CN

Funding

Ronggui Hu XDB19000000, XDA12040323,815250192019YFA0802103, 2018YFA0508200, 2018ZX10101004
6 · The paper itself

Abstract

Global identification of substrates for PTMs (post-translational modifications) represents a critical but yet dauntingly challenging task in understanding biology and disease pathology. Here we presented a synthetic biology approach, namely 'YESS', which coupled Y2H (yeast two hybrid) interactome screening with PTMs reactions reconstituted in bacteria for substrates identification and validation, followed by the functional validation in mammalian cells. Specifically, the sequence-independent Gateway

Indexed as

Cell LineCloning, MolecularHEK293 CellsHeLa CellsHumansOpen Reading FramesProtein Processing, Post-TranslationalSignal TransductionSynthetic BiologyTwo-Hybrid System TechniquesUbiquitinUbiquitin-Protein LigasesUBE3A protein, humanUbiquitinUbiquitin-Protein LigasesUFL1 protein, humanpost-translational modificationsUBE3AubiquitinationUFL1ufmylation

Identifiers

PMID32545848
PMCPMC7352202
OpenAlexW3035760265

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.