Evidence map›Paper›PMID 32544429›Full record

ReviewBiochimica et biophysica acta. Molecular basis of disease2020

Insights into SARS-CoV-2 genome, structure, evolution, pathogenesis and therapies: Structural genomics approach.

Ahmad Abu Turab Naqvi, Kisa Fatima, Taj Mohammad, Urooj Fatima, Indrakant K Singh, Archana Singh, Shaikh Muhammad Atif, Gururao Hariprasad, Gulam Mustafa Hasan, Md Imtaiyaz Hassan

Open access · greenAbstract readReview
In one paragraph

Review in Biochimica et biophysica acta. Molecular basis of disease, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 582 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
582citing papers in PubMed, 1 pooled it
24.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

582 citing papers in PubMed, 1 synthesis or guideline pooled it, 1,162 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Nanobodies targeting SARS-CoV-2 variants.Acta pharmaceutica Sinica. B · 2026
    Review
  6. Review
  7. Article
  8. Review
  9. Review
  10. Review
  11. Review
  12. Observational
  13. Article
  14. Review
  15. COVID-19, the disease that changed the world.Medicine and pharmacy reports · 2026
    Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article

522 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 3 countries.

Ahmad Abu Turab NaqviCentre for Interdisciplinary Research in Basic Sciences, Jamia Millia Islamia, Jamia Nagar, New Delhi 110025, India.
Kisa FatimaDepartment of Biotechnology, Jamia Millia Islamia, Jamia Nagar, New Delhi 110025, India.
Taj MohammadCentre for Interdisciplinary Research in Basic Sciences, Jamia Millia Islamia, Jamia Nagar, New Delhi 110025, India.
Urooj FatimaDepartment of Botany, Aligarh Muslim University, Aligarh 202002, U.P., India.
Indrakant K SinghDepartment of Zoology, Deshbandhu College, University of Delhi, Kalkaji, New Delhi 110 019, India.
Archana SinghDepartment of Botany, Hansraj College, University of Delhi, Delhi, 110007, India.
Shaikh Muhammad AtifDepartment of Medicine, University of Colorado, Aurora, CO, USA.
Gururao HariprasadDepartment of Biophysics, All India Institute of Medical Sciences, New Delhi 110029, India.
Gulam Mustafa HasanDepartment of Biochemistry, College of Medicine, Prince Sattam Bin Abdulaziz University, P.O. Box 173, Al-Kharj 11942, Saudi Arabia.
Md Imtaiyaz HassanCentre for Interdisciplinary Research in Basic Sciences, Jamia Millia Islamia, Jamia Nagar, New Delhi 110025, India. Electronic address: mihassan@jmi.ac.in.
Jamia Millia Islamia · INUniversity of Delhi · INAligarh Muslim University · INAll India Institute of Medical Sciences · INDepartment of Biotechnology · INPrince Sattam Bin Abdulaziz University · SAUniversity of Colorado Anschutz Medical Campus · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The sudden emergence of severe respiratory disease, caused by a novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), has recently become a public health emergency. Genome sequence analysis of SARS-CoV-2 revealed its close resemblance to the earlier reported SARS-CoV and Middle East respiratory syndrome coronavirus (MERS-CoV). However, initial testing of the drugs used against SARS-CoV and MERS-CoV has been ineffective in controlling SARS-CoV-2. The present study highlights the genomic, proteomic, pathogenesis, and therapeutic strategies in SARS-CoV-2 infection. We have carried out sequence analysis of potential drug target proteins in SARS-CoV-2 and, compared them with SARS-CoV and MERS viruses. Analysis of mutations in the coding and non-coding regions, genetic diversity, and pathogenicity of SARS-CoV-2 has also been done. A detailed structural analysis of drug target proteins has been performed to gain insights into the mechanism of pathogenesis, structure-function relationships, and the development of structure-guided therapeutic approaches. The cytokine profiling and inflammatory signalling are different in the case of SARS-CoV-2 infection. We also highlighted possible therapies and their mechanism of action followed by clinical manifestation. Our analysis suggests a minimal variation in the genome sequence of SARS-CoV-2, may be responsible for a drastic change in the structures of target proteins, which makes available drugs ineffective.

Indexed as

Genome, ViralBetacoronavirusCoronavirus InfectionsCOVID-19CytokinesGenetic VariationHumansMiddle East Respiratory Syndrome CoronavirusPandemicsPneumonia, ViralRNA-Dependent RNA PolymeraseSARS-CoV-2Spike Glycoprotein, CoronavirusCytokinesRNA-Dependent RNA PolymeraseSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2Comparative genomicsCOVID-19Drug targetMolecular basis of pathogenesisMolecular evolutionSARS-CoV-2

Identifiers

PMID32544429
PMCPMC7293463
OpenAlexW3035265089

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.