Evidence map›Paper›PMID 32544423›Full record

ReviewReproductive toxicology (Elmsford, N.Y.)2020

Retinoids and developmental neurotoxicity: Utilizing toxicogenomics to enhance adverse outcome pathways and testing strategies.

Hao Chen, Megan A Chidboy, Joshua F Robinson

Open access · greenAbstract readReview
In one paragraph

Review in Reproductive toxicology (Elmsford, N.Y.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Hao ChenCenter for Reproductive Sciences and Department of Obstetrics, Gynecology, and Reproductive Sciences, University of California, San Francisco (UCSF), San Francisco, CA, USA. Electronic address: hao.chen@ucsf.edu.
Megan A ChidboyCenter for Reproductive Sciences and Department of Obstetrics, Gynecology, and Reproductive Sciences, University of California, San Francisco (UCSF), San Francisco, CA, USA. Electronic address: meganchidboy@berkeley.edu.
Joshua F RobinsonCenter for Reproductive Sciences and Department of Obstetrics, Gynecology, and Reproductive Sciences, University of California, San Francisco (UCSF), San Francisco, CA, USA. Electronic address: joshua.robinson@ucsf.edu.
University of California, San Francisco · USReproductive Science Center · US

Funding

Polybrominated Diphenyl Ether Effects on Human Neuronal DevelopmentR00ES023846 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ROBINSON, JOSHUA FREDERICK · 2016 to 2018
$740k
Polybrominated Diphenyl Ether Effects on Human Neuronal DevelopmentK99ES023846 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ROBINSON, JOSHUA FREDERICK · 2014 to 2015
$200k
Perfluroalkylated Substances Exposures and Cytotrophoblast DifferentiationK99ES030401 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHEN, HAO · 2020 to 2021
$184k
NIEHS NIH HHS K99 ES023846NIEHS NIH HHS K99 ES030401NIEHS NIH HHS R00 ES023846
6 · The paper itself

Abstract

The use of genomic approaches in toxicological studies has greatly increased our ability to define the molecular profiles of environmental chemicals associated with developmental neurotoxicity (DNT). Integration of these approaches with adverse outcome pathways (AOPs), a framework that translates environmental exposures to adverse developmental phenotypes, can potentially inform DNT testing strategies. Here, using retinoic acid (RA) as a case example, we demonstrate that the integration of toxicogenomic profiles into the AOP framework can be used to establish a paradigm for chemical testing. RA is a critical regulatory signaling molecule involved in multiple aspects of mammalian central nervous system (CNS) development, including hindbrain formation/patterning and neuronal differentiation, and imbalances in RA signaling pathways are linked with DNT. While the mechanisms remain unresolved, environmental chemicals can cause DNT by disrupting the RA signaling pathway. First, we reviewed literature evidence of RA and other retinoid exposures and DNT to define a provisional AOP related to imbalances in RA embryonic bioavailability and hindbrain development. Next, by integrating toxicogenomic datasets, we defined a relevant transcriptomic signature associated with RA-induced developmental neurotoxicity (RA-DNT) in human and rodent models that was tested against zebrafish model data, demonstrating potential for integration into an AOP framework. Finally, we demonstrated how these approaches may be systematically utilized to identify chemical hazards by testing the RA-DNT signature against azoles, a proposed class of compounds that alters RA-signaling. The provisional AOP from this study can be expanded in the future to better define DNT biomarkers relevant to RA signaling and toxicity.

Indexed as

Neurotoxicity SyndromesAdverse Outcome PathwaysAnimalsEmbryonic DevelopmentHumansRetinoidsToxicity TestsToxicogeneticsRetinoidsAlternative modelAzolesEmbryonic stem cellsHumanIn vitroNeurogenesisNeurotoxicityRetinoic acidRetinoidsTranscriptomeWhole embryo cultureZebrafish

Identifiers

PMID32544423
PMCPMC7736340
OpenAlexW3035155046

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.