Evidence map›Paper›PMID 32544205›Full record

ArticlePloS one2020

Genome-wide identification and expression analysis of jasmonate ZIM domain gene family in tuber mustard (Brassica juncea var. tumida).

Zhaoming Cai, Yuanqing Chen, Jingjing Liao, Diandong Wang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

  1. Pan-genome landscape of the JAZ family in pepper (Frontiers in plant science · 2026
    Article
  2. Genome-Wide Analysis of theInternational journal of molecular sciences · 2025
    Article
  3. Article
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  10. New Insights Into Structure and Function ofFrontiers in genetics · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Zhaoming CaiCollege of Life Science and Technology, Yangtze Normal University, Chongqing, P.R. China.
Yuanqing ChenCollege of Life Science and Technology, Yangtze Normal University, Chongqing, P.R. China.
Jingjing LiaoCollege of Life Science and Technology, Yangtze Normal University, Chongqing, P.R. China.
Diandong WangCollege of Life Science and Technology, Yangtze Normal University, Chongqing, P.R. China.ORCID 0000-0002-7661-2682
Yangtze Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tuber mustard, which is the raw material of Fuling pickle, is a crop with great economic value. However, during growth and development, tuber mustard is frequently attacked by the pathogen Plasmodiophora brassicae and frequently experiences salinity stress. Jasmonic acid (JA) is a hormone related to plant resistance to biotic and abiotic stress. Jasmonate ZIM domain proteins (JAZs) are crucial components of the JA signaling pathway and play important roles in plant responses to biotic and abiotic stress. To date, no information is available about the characteristics of the JAZ family genes in tuber mustard. Here, 38 BjJAZ genes were identified in the whole genome of tuber mustard. The BjJAZ genes are located on 17 of 18 chromosomes in the tuber mustard genome. The gene structures and protein motifs of the BjJAZ genes are conserved between tuber mustard and Arabidopsis. The results of qRT-PCR analysis showed that BjuA030800 was specifically expressed in root, and BjuA007483 was specifically expressed in leaf. In addition, 13 BjJAZ genes were transiently induced by P. brassicae at 12 h, and 7 BjJAZ genes were induced by salt stress from 12 to 24 h. These results provide valuable information for further studies on the role of BjJAZ genes in the regulation of plant growth and development and in the response to biotic and abiotic stress.

Indexed as

Genome, PlantArabidopsisCyclopentanesGene Expression Regulation, PlantMultigene FamilyMustard PlantOxylipinsPhylogenyPlant LeavesPlant ProteinsPlant RootsProtein DomainsRepressor ProteinsRNA, PlantStress, PhysiologicalCyclopentanesjasmonic acidOxylipinsPlant ProteinsRepressor ProteinsRNA, Plant

Identifiers

PMID32544205
PMCPMC7297370
OpenAlexW3034549055

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.