Evidence map›Paper›PMID 32544203›Full record

ArticlePLoS genetics2020

yippee like 3 (ypel3) is a novel gene required for myelinating and perineurial glia development.

Bernardo Blanco-Sánchez, Aurélie Clément, Sara J Stednitz, Jennifer Kyle, Judy L Peirce, Marcie McFadden, Jeremy Wegner, Jennifer B Phillips, Ellen Macnamara, Yan Huang and 13 more

Erratum issued Registry-linked trialOpen access · goldAbstract readCase Reports
In one paragraph

Article in PLoS genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to trial NCT02450851 (Clinical and Genetic Evaluation of Patients With Undiagnosed Disorders Through the Undiagnosed Diseases Network), which is not on this map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02450851 recruitingnot on this map

Clinical and Genetic Evaluation of Patients With Undiagnosed Disorders Through the Undiagnosed Diseases Network

TypeobservationalSponsorNational Human Genome Research Institute (NHGRI)Ran2015 to 2028Enrolled20,000ConditionsGenetic Disease
3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

  1. The YPEL genePlant signaling & behavior · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Peripheral glia diversity.Journal of anatomy · 2022
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. The intriguing perineurial cells - an updated overview of their origin, structure, functions and implication in pathology.Romanian journal of morphology and embryology = Revue roumaine de morphologie et embryologie
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors at 4 institutions in 1 country.

Bernardo Blanco-SánchezInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.ORCID 0000-0001-9438-2633
Aurélie ClémentInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.
Sara J StednitzInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.ORCID 0000-0002-8223-1528
Jennifer KylePacific Northwest National Laboratory, Richland, Washington, United States of America.
Judy L PeirceInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.
Marcie McFaddenInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.ORCID 0000-0002-7281-2660
Jeremy WegnerInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.
Jennifer B PhillipsInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.ORCID 0000-0001-7119-7902
Ellen MacnamaraNational Institutes of Health Undiagnosed Diseases Program, Common Fund, Office of the Director, National Institutes of Health, Bethesda, Maryland, United States of America.ORCID 0000-0002-9418-3287
Yan HuangNational Institutes of Health Undiagnosed Diseases Program, Common Fund, Office of the Director, National Institutes of Health, Bethesda, Maryland, United States of America.
David R AdamsNational Institutes of Health Undiagnosed Diseases Program, Common Fund, Office of the Director, National Institutes of Health, Bethesda, Maryland, United States of America.
Camilo ToroNational Institutes of Health Undiagnosed Diseases Program, Common Fund, Office of the Director, National Institutes of Health, Bethesda, Maryland, United States of America.
William A GahlNational Institutes of Health Undiagnosed Diseases Program, Common Fund, Office of the Director, National Institutes of Health, Bethesda, Maryland, United States of America.ORCID 0000-0002-2494-6752
May Christine V MalicdanNational Institutes of Health Undiagnosed Diseases Program, Common Fund, Office of the Director, National Institutes of Health, Bethesda, Maryland, United States of America.ORCID 0000-0003-1697-6959
Cynthia J TifftNational Institutes of Health Undiagnosed Diseases Program, Common Fund, Office of the Director, National Institutes of Health, Bethesda, Maryland, United States of America.
Erika M ZinkPacific Northwest National Laboratory, Richland, Washington, United States of America.ORCID 0000-0003-0754-9816
Kent J BloodsworthPacific Northwest National Laboratory, Richland, Washington, United States of America.ORCID 0000-0002-7596-1565
Kelly G StrattonPacific Northwest National Laboratory, Richland, Washington, United States of America.ORCID 0000-0002-1721-9688
Undiagnosed Diseases Network
David M KoellerMolecular and Medical Genetics, School of Medicine, Oregon Health and Science University, Portland, Oregon, United States of America.
Thomas O MetzPacific Northwest National Laboratory, Richland, Washington, United States of America.ORCID 0000-0001-6049-3968
Philip WashbourneInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.ORCID 0000-0003-1851-1282
Monte WesterfieldInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America.ORCID 0000-0003-1187-7839
University of Oregon · USNational Institutes of Health · USPacific Northwest National Laboratory · USOregon Health & Science University · US

Funding

Human Biochemical GeneticsZIAHG000215 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI GAHL, WILLIAM · 2009 to 2025
$72.6M
Zebrafish CoreU54NS093793 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2015 to 2022
$7.5M
DEVELOPMENTAL BIOLOGY TRAINING PROGRAMT32HD007348 · NICHD · UNIVERSITY OF OREGON · PI Chris Q Doe, KRYN STANKUNAS · 1989 to 2026
$6.8M
Undiagnosed Diseases Network Metabolomics Core SupplementU01TR001395 · NCATS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI KOELLER, DAVID M, METZ, THOMAS O · 2015 to 2018
$2.3M
Genetic and functional analysis of YPEL3 and its link to diseaseR21GM114438 · NIGMS · UNIVERSITY OF OREGON · PI WESTERFIELD, MONTE · 2015 to 2016
$392k
NCATS NIH HHS U01 TR001395NICHD NIH HHS T32 HD007348NIGMS NIH HHS R21 GM114438NINDS NIH HHS U54 NS093793
6 · The paper itself

Abstract

Hypomyelination, a neurological condition characterized by decreased production of myelin sheets by glial cells, often has no known etiology. Elucidating the genetic causes of hypomyelination provides a better understanding of myelination, as well as means to diagnose, council, and treat patients. Here, we present evidence that YIPPEE LIKE 3 (YPEL3), a gene whose developmental role was previously unknown, is required for central and peripheral glial cell development. We identified a child with a constellation of clinical features including cerebral hypomyelination, abnormal peripheral nerve conduction, hypotonia, areflexia, and hypertrophic peripheral nerves. Exome and genome sequencing revealed a de novo mutation that creates a frameshift in the open reading frame of YPEL3, leading to an early stop codon. We used zebrafish as a model system to validate that YPEL3 mutations are causative of neuropathy. We found that ypel3 is expressed in the zebrafish central and peripheral nervous system. Using CRISPR/Cas9 technology, we created zebrafish mutants carrying a genomic lesion similar to that of the patient. Our analysis revealed that Ypel3 is required for development of oligodendrocyte precursor cells, timely exit of the perineurial glial precursors from the central nervous system (CNS), formation of the perineurium, and Schwann cell maturation. Consistent with these observations, zebrafish ypel3 mutants have metabolomic signatures characteristic of oligodendrocyte and Schwann cell differentiation defects, show decreased levels of Myelin basic protein in the central and peripheral nervous system, and develop defasciculated peripheral nerves. Locomotion defects were observed in adult zebrafish ypel3 mutants. These studies demonstrate that Ypel3 is a novel gene required for perineurial cell development and glial myelination.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsBrachial PlexusChildDisease Models, AnimalDNA Mutational AnalysisEmbryo, NonmammalianExome SequencingFemaleFrameshift MutationGray MatterHereditary Central Nervous System Demyelinating DiseasesHumansMagnetic Resonance ImagingMyelin SheathNeurogenesisTumor Suppressor ProteinsYPEL3 protein, humanZebrafish Proteins

Identifiers

PMID32544203
PMCPMC7319359
OpenAlexW3034604379

What OpenQuestion holds

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Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.