Evidence map›Paper›PMID 32544202›Full record

ArticlePloS one2020

Genetic analysis of body weight in wild populations of medaka fish from different latitudes.

Tamiris I Yassumoto, Mana Nakatsukasa, Atsushi J Nagano, Masaki Yasugi, Takashi Yoshimura, Ai Shinomiya

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Tamiris I YassumotoLaboratory of Animal Integrative Physiology, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan.
Mana NakatsukasaLaboratory of Animal Integrative Physiology, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan.ORCID 0000-0003-1895-6839
Atsushi J NaganoFaculty of Agriculture, Ryukoku University, Otsu, Shiga, Japan.
Masaki YasugiLaboratory of Neurophysiology, National Institute for Basic Biology, National Institutes of Natural Sciences, Okazaki, Aichi, Japan.
Takashi YoshimuraLaboratory of Animal Integrative Physiology, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan.ORCID 0000-0001-7018-9652
Ai ShinomiyaDivision of Seasonal Biology, National Institute for Basic Biology, National Institutes of Natural Sciences, Okazaki, Aichi, Japan.
National Institute for Basic Biology · JPNagoya University · JPRyukoku University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genetic bases of growth and body weight are of economic and scientific interest, and teleost fish models have proven useful in such investigations. The Oryzias latipes species complex (medaka) is an abundant freshwater fish in Japan and suitable for genetic studies. We compared two wild medaka stocks originating from different latitudes. The Maizuru population from higher latitudes weighed more than the Ginoza population. We investigated the genetic basis of body weight, using quantitative trait locus (QTL) analysis of the F2 offspring of these populations. We detected one statistically significant QTL for body weight on medaka chromosome 4 and identified 12 candidate genes that might be associated with body weight or growth. Nine of these 12 genes had at least one single nucleotide polymorphism that caused amino acid substitutions in protein-coding regions, and we estimated the effects of these substitutions. The present findings might contribute to the marker-assisted selection of economically important aquaculture species.

Indexed as

Genetic VariationAmino Acid SequenceAnimalsBody WeightChromosomesFish ProteinsOryziasPolymorphism, Single NucleotideQuantitative Trait LociSequence AlignmentFish Proteins

Identifiers

PMID32544202
PMCPMC7297337
OpenAlexW3034421477

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.