Evidence map›Paper›PMID 32544089›Full record

ArticleJCI insight2020

Proteomics identifies a convergent innate response to infective endocarditis and extensive proteolysis in vegetation components.

Daniel R Martin, James C Witten, Carmela D Tan, E Rene Rodriguez, Eugene H Blackstone, Gosta B Pettersson, Deborah E Seifert, Belinda B Willard, Suneel S Apte

Open access · goldAbstract read
In one paragraph

Article in JCI insight, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Statin therapy improves outcomes in infective endocarditis: evidence from a meta-analysis.The Egyptian heart journal : (EHJ) : official bulletin of the Egyptian Society of Cardiology · 2024
    Review
  8. Histopathology reveals concealed aortic valve inflammation.Journal of cardiothoracic surgery · 2024
    Article
  9. UnderstandingCells · 2023
    Article
  10. Article
  11. Article
  12. Neutrophils Protect AgainstArteriosclerosis, thrombosis, and vascular biology · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Daniel R MartinDepartment of Biomedical Engineering, Lerner Research Institute.
James C WittenDepartment of Thoracic and Cardiovascular Surgery, Miller Family Heart and Vascular Institute.
Carmela D TanDepartment of Pathology, Robert J. Tomsich Pathology & Laboratory Medicine Institute, and.
E Rene RodriguezDepartment of Pathology, Robert J. Tomsich Pathology & Laboratory Medicine Institute, and.
Eugene H BlackstoneDepartment of Thoracic and Cardiovascular Surgery, Miller Family Heart and Vascular Institute.
Gosta B PetterssonDepartment of Thoracic and Cardiovascular Surgery, Miller Family Heart and Vascular Institute.
Deborah E SeifertDepartment of Biomedical Engineering, Lerner Research Institute.
Belinda B WillardProteomics and Metabolomics Core, Lerner Research Institute, Cleveland Clinic, Cleveland, Ohio, USA.
Suneel S ApteDepartment of Biomedical Engineering, Lerner Research Institute.
Cerner (United States) · USUnited Heart and Vascular Clinic · USCleveland Clinic Lerner College of Medicine · US

Funding

High-End Instrumentation (HEI) Grant Program (S10)S10OD023436 · OD · CLEVELAND CLINIC LERNER COM-CWRU · PI WILLARD, BELINDA BELLE · 2017 to 2017
$873k
NIH HHS S10 OD023436
6 · The paper itself

Abstract

Infective endocarditis is a life-threatening infection of heart valves and adjacent structures characterized by vegetations on valves and other endocardial surfaces, with tissue destruction and risk of embolization. We used high-resolution mass spectrometry to define the proteome of staphylococcal and non-staphylococcal vegetations and Terminal Amine Isotopic Labeling of Substrates (TAILS) to define their proteolytic landscapes. These approaches identified over 2000 human proteins in staphylococcal and non-staphylococcal vegetations. Individual vegetation proteomes demonstrated comparable profiles of quantitatively major constituents that overlapped with serum, platelet, and neutrophil proteomes. Staphylococcal vegetation proteomes resembled one another more than the proteomes of non-staphylococcal vegetations. TAILS demonstrated extensive proteolysis within vegetations, with numerous previously undescribed cleavages. Several proteases and pathogen-specific proteins, including virulence factors, were identified in most vegetations. Proteolytic peptides in fibronectin and complement C3 were identified as potential infective endocarditis biomarkers. Overlap of staphylococcal and non-staphylococcal vegetation proteomes suggests a convergent thrombotic and immune response to endocardial infection by diverse pathogens. However, the differences between staphylococcal and non-staphylococcal vegetations and internal variance within the non-staphylococcal group indicate that additional pathogen- or patient-specific effects exist. Pervasive proteolysis of vegetation components may arise from vegetation-intrinsic proteases and destabilize vegetations, contributing to embolism.

Indexed as

AdultAgedAortic ValveEmbolismEndocarditisFemaleHumansImmunity, InnateMaleMiddle AgedNeutrophilsProteolysisProteomicsStaphylococcal InfectionsCardiologyInfectious diseaseProteasesProteomics

Identifiers

PMID32544089
PMCPMC7453909
OpenAlexW3034827916

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.