Evidence map›Paper›PMID 32543126›Full record

ArticleMolecular genetics & genomic medicine2020

Efficiency of noninvasive prenatal testing for the detection of fetal microdeletions and microduplications in autosomal chromosomes.

Yuanyuan Pei, Liang Hu, Jinxing Liu, Lijuan Wen, Xiaojin Luo, Jian Lu, Fengxiang Wei

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in Molecular genetics & genomic medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
6.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Yuanyuan PeiGenetic Laboratory of Shenzhen Longgang Maternal and Child Health Hospital, Shenzhen, Guangdong, China.
Liang HuGenetic Laboratory of Shenzhen Longgang Maternal and Child Health Hospital, Shenzhen, Guangdong, China.
Jinxing LiuGenetic Laboratory of Shenzhen Longgang Maternal and Child Health Hospital, Shenzhen, Guangdong, China.
Lijuan WenGenetic Laboratory of Shenzhen Longgang Maternal and Child Health Hospital, Shenzhen, Guangdong, China.
Xiaojin LuoGenetic Laboratory of Shenzhen Longgang Maternal and Child Health Hospital, Shenzhen, Guangdong, China.
Jian LuMedical Genetic Centre of Guangdong Women and Children Hospital, Guangzhou, Guangdong, China.
Fengxiang WeiGenetic Laboratory of Shenzhen Longgang Maternal and Child Health Hospital, Shenzhen, Guangdong, China.ORCID 0000-0001-7559-2504
Shenzhen Maternity and Child Healthcare Hospital · CNGuangdong Province Women and Children Hospital · CNJiamusi University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNoninvasive prenatal testing (NIPT) is commonly used to screen for fetal genetic abnormalities. However, the ability of NIPT to detect copy number variations (CNVs) has not been reported. Accordingly, in this study, we analyzed the efficiency of NIPT for the detection of fetal autosomal CNVs.

methodsPatients who were positive for autosomal CNVs by NIPT and underwent diagnostic studies by karyotype analysis and chromosomal microarray (CMA) were evaluated. Samples were divided into groups according to age, in vitro fertilization, fetal-free DNA concentration, uniquely mapped reads number, CNV size, and CNV type.

resultsChromosomal microarray showed that the positive predictive value (PPV) of autosomal CNVs detected by NIPT was 14.89%. Increasing fetal DNA concentrations and uniquely mapped read numbers did not affect the PPV of CNVs detected by NIPT. There were no differences between microduplication and microdeletion PPVs detected by NIPT. The PPV of CNVs less than 10 Mb was significantly higher than that of CNVs greater than 10 Mb detected by NIPT.

conclusionThe accuracy of NIPT for autosomal CNVs needs to be improved.

Indexed as

Chromosome DeletionChromosome DuplicationAdultChromosome DisordersDNA Copy Number VariationsFemaleHumansKaryotypingNoninvasive Prenatal TestingSensitivity and Specificitychromosomal microarraycopy number variationkaryotype analysisnoninvasive prenatal testingpositive predictive value

Identifiers

PMID32543126
PMCPMC7434727
OpenAlexW3034742631

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.