Evidence map›Paper›PMID 32542325›Full record

ArticleBlood2020

Lysine acetyltransferase Tip60 is required for hematopoietic stem cell maintenance.

Akihiko Numata, Hui Si Kwok, Qi-Ling Zhou, Jia Li, Roberto Tirado-Magallanes, Vladimir Espinosa Angarica, Rebecca Hannah, Jihye Park, Chelsia Qiuxia Wang, Vaidehi Krishnan and 13 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 47 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Chromatin remodeling in tissue stem cell fate determination.Cell regeneration (London, England) · 2024
    Review
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Review
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  16. Article
  17. MBTD1 preserves adult hematopoietic stem cell pool size and function.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 9 institutions in 7 countries.

Akihiko NumataCancer Science Institute of Singapore, National University of Singapore, Singapore.
Hui Si KwokCancer Science Institute of Singapore, National University of Singapore, Singapore.
Qi-Ling ZhouCancer Science Institute of Singapore, National University of Singapore, Singapore.
Jia LiCancer Science Institute of Singapore, National University of Singapore, Singapore.
Roberto Tirado-MagallanesCancer Science Institute of Singapore, National University of Singapore, Singapore.
Vladimir Espinosa AngaricaCancer Science Institute of Singapore, National University of Singapore, Singapore.
Rebecca HannahDepartment of Haematology, Wellcome and Medical Research Council Cambridge Stem Cell Institute, and.
Jihye ParkDepartment of Pathology, Beth Israel Deaconess Medical Center, Boston, MA.
Chelsia Qiuxia WangCancer Science Institute of Singapore, National University of Singapore, Singapore.
Vaidehi KrishnanCancer Science Institute of Singapore, National University of Singapore, Singapore.
Deepa RajagopalanCancer Science Institute of Singapore, National University of Singapore, Singapore.
Yanzhou ZhangCancer Science Institute of Singapore, National University of Singapore, Singapore.
Siqin ZhouCancer Science Institute of Singapore, National University of Singapore, Singapore.
Robert S WelnerHematology Oncology, Department of Medicine, The University of Alabama at Birmingham Comprehensive Cancer Center, Birmingham, AL.
Motomi OsatoCancer Science Institute of Singapore, National University of Singapore, Singapore.
Sudhakar JhaCancer Science Institute of Singapore, National University of Singapore, Singapore.
Stefan K BohlanderLeukaemia and Blood Cancer Research Unit, Department of Molecular Medicine and Pathology, University of Auckland, Auckland, New Zealand.
Berthold GöttgensDepartment of Haematology, Wellcome and Medical Research Council Cambridge Stem Cell Institute, and.
Henry YangCancer Science Institute of Singapore, National University of Singapore, Singapore.
Touati BenoukrafCancer Science Institute of Singapore, National University of Singapore, Singapore.
John W LoughDepartment of Cell Biology, Neurobiology, and Anatomy, and the Cardiovascular Center, Medical College of Wisconsin, Milwaukee, WI; and.
Deepak BarariaCancer Science Institute of Singapore, National University of Singapore, Singapore.
Daniel G TenenCancer Science Institute of Singapore, National University of Singapore, Singapore.
National University of Singapore · SGHarvard University · USUniversity of Cambridge · GBBeth Israel Deaconess Medical Center · USKyushu University · JPMedical College of Wisconsin · USMemorial University of Newfoundland · CAUniversity of Alabama at Birmingham · USUniversity of Auckland · NZ

Funding

Transcriptional and epigenetic heterogeneity of stem/progenitor cellsP01HL131477 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI DANIEL G TENEN · 2017 to 2026
$24.6M
Mechanisms of regulation by RNA in acute myeloid leukemiaR35CA197697 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI TENEN, DANIEL G · 2015 to 2021
$7.1M
Cancer Research UK 21762Cancer Research UK C1163/A21762Medical Research Council MC_PC_12009NCI NIH HHS R35 CA197697NHLBI NIH HHS P01 HL131477Wellcome Trust 206328/Z/17/Z
6 · The paper itself

Abstract

Hematopoietic stem cells (HSCs) have the potential to replenish the blood system for the lifetime of the organism. Their 2 defining properties, self-renewal and differentiation, are tightly regulated by the epigenetic machineries. Using conditional gene-knockout models, we demonstrated a critical requirement of lysine acetyltransferase 5 (Kat5, also known as Tip60) for murine HSC maintenance in both the embryonic and adult stages, which depends on its acetyltransferase activity. Genome-wide chromatin and transcriptome profiling in murine hematopoietic stem and progenitor cells revealed that Tip60 colocalizes with c-Myc and that Tip60 deletion suppress the expression of Myc target genes, which are associated with critical biological processes for HSC maintenance, cell cycling, and DNA repair. Notably, acetylated H2A.Z (acH2A.Z) was enriched at the Tip60-bound active chromatin, and Tip60 deletion induced a robust reduction in the acH2A.Z/H2A.Z ratio. These results uncover a critical epigenetic regulatory layer for HSC maintenance, at least in part through Tip60-dependent H2A.Z acetylation to activate Myc target genes.

Indexed as

AnimalsBiomarkersCell CycleCell DifferentiationCell Self RenewalDNA DamageGene Expression ProfilingGene Expression RegulationHematopoietic Stem CellsHistonesLysine Acetyltransferase 5MiceProtein TransportTrans-ActivatorsBiomarkersHistonesKat5 protein, mouseLysine Acetyltransferase 5Trans-Activators

Identifiers

PMID32542325
PMCPMC7544546
OpenAlexW2964488893

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.