Evidence map›Paper›PMID 32542106›Full record

ArticleComputational and structural biotechnology journal2020

Desaturase specificity is controlled by the physicochemical properties of a single amino acid residue in the substrate binding tunnel.

Aleš Buček, Mario Vazdar, Michal Tupec, Aleš Svatoš, Iva Pichová

Open access · goldAbstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Structure and Function of Alkane Monooxygenase (AlkB).Accounts of chemical research · 2023
    Review
  3. Article
  4. Article
  5. Biosynthesis of Fatty Acid Derivatives by RecombinantJournal of fungi (Basel, Switzerland) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 4 countries.

Aleš BučekInstitute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo n., 2, 166 10 Prague 6, Czech Republic.
Mario VazdarDivision of Organic Chemistry and Biochemistry, Ruđer Bošković Institute, Bijenička 54, HR-10000 Zagreb, Croatia.
Michal TupecInstitute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo n., 2, 166 10 Prague 6, Czech Republic.
Aleš SvatošInstitute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo n., 2, 166 10 Prague 6, Czech Republic.
Iva PichováInstitute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo n., 2, 166 10 Prague 6, Czech Republic.
Czech Academy of Sciences, Institute of Organic Chemistry and Biochemistry · CZMax Planck Institute for Chemical Ecology · DEOkinawa Institute of Science and Technology Graduate University · JPRuđer Bošković Institute · HR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Membrane fatty acyl desaturases (mFAD) are ubiquitous enzymes in eukaryotes. They introduce double bonds into fatty acids (FAs), producing structurally diverse unsaturated FAs which serve as membrane lipid components or precursors of signaling molecules. The mechanisms controlling enzymatic specificity and selectivity of desaturation are, however, poorly understood. We found that the physicochemical properties, particularly side chain volume, of a single amino acid (aa) residue in insect mFADs (Lepidoptera:

Indexed as

Acyl-CoA desaturaseBombyx moriEnzymatic specificityManduca sextaMolecular dynamics simulationsProtein engineering

Identifiers

PMID32542106
PMCPMC7283083
OpenAlexW3025042701

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.