Evidence map›Paper›PMID 32541887›Full record

ArticleScientific reports2020

A Neural Network Approach to Quantify Blood Flow from Retinal OCT Intensity Time-Series Measurements.

Boy Braaf, Sabine Donner, Néstor Uribe-Patarroyo, Brett E Bouma, Benjamin J Vakoc

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  9. Deep Learning in Biomedical Optics.Lasers in surgery and medicine · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Boy BraafWellman Center for Photomedicine, Massachusetts General Hospital, Boston, MA, USA.
Sabine DonnerHeidelberg Engineering GmbH, Heidelberg, Germany.
Néstor Uribe-PatarroyoWellman Center for Photomedicine, Massachusetts General Hospital, Boston, MA, USA.
Brett E BoumaWellman Center for Photomedicine, Massachusetts General Hospital, Boston, MA, USA.
Benjamin J VakocWellman Center for Photomedicine, Massachusetts General Hospital, Boston, MA, USA. bvakoc@mgh.harvard.edu.
Massachusetts General Hospital · USHarvard University · USMassachusetts Institute of Technology · US

Funding

TRD3: Percutaneous and Interstitial ImagingP41EB015903 · NIBIB · MASSACHUSETTS GENERAL HOSPITAL · PI Brett E Bouma · 2012 to 2026
$22.4M
Blood flow-based guidance and diagnostics using OCTK25EB024595 · NIBIB · MASSACHUSETTS GENERAL HOSPITAL · PI URIBE-PATARROYO, NESTOR · 2017 to 2021
$825k
NIBIB NIH HHS K25 EB024595NIBIB NIH HHS P41 EB015903
6 · The paper itself

Abstract

Many diseases of the eye are associated with alterations in the retinal vasculature that are possibly preceded by undetected changes in blood flow. In this work, a robust blood flow quantification framework is presented based on optical coherence tomography (OCT) angiography imaging and deep learning. The analysis used a forward signal model to simulate OCT blood flow data for training of a neural network (NN). The NN was combined with pre- and post-processing steps to create an analysis framework for measuring flow rates from individual blood vessels. The framework's accuracy was validated using both blood flow phantoms and human subject imaging, and across flow speed, vessel angle, hematocrit levels, and signal-to-noise ratio. The reported flow rate of the calibrated NN framework was measured to be largely independent of vessel angle, hematocrit levels, and measurement signal-to-noise ratio. In vivo retinal flow rate measurements were self-consistent across vascular branch points, and approximately followed a predicted power-law dependence on the vessel diameter. The presented OCT-based NN flow rate estimation framework addresses the need for a robust, deployable, and label-free quantitative retinal blood flow mapping technique.

Indexed as

Neural Networks, ComputerBlood Flow VelocityDeep LearningHumansRetinaRetinal VesselsTime FactorsTomography, Optical Coherence

Identifiers

PMID32541887
PMCPMC7295995
OpenAlexW3034608651

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.