Evidence map›Paper›PMID 32541820›Full record

ArticleNature communications2020

Aβ(1-42) tetramer and octamer structures reveal edge conductivity pores as a mechanism for membrane damage.

Sonia Ciudad, Eduard Puig, Thomas Botzanowski, Moeen Meigooni, Andres S Arango, Jimmy Do, Maxim Mayzel, Mariam Bayoumi, Stéphane Chaignepain, Giovanni Maglia and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 132 papers.

0numbers the graph read from it
0cells of the map it votes in
132citing papers in PubMed
18.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

132 citing papers in PubMed, 235 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. A Model for the Development of Alzheimer's Disease.Genomics, proteomics & bioinformatics · 2025
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review

72 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 6 countries.

Sonia Ciudad *University of Bordeaux, CBMN (UMR 5248)-CNRS-IPB, Institut Européen de Chimie et Biologie, 2 rue Escarpit, 33600, Pessac, France.ORCID http://orcid.org/0000-0002-9030-175X
Eduard Puig *University of Bordeaux, CBMN (UMR 5248)-CNRS-IPB, Institut Européen de Chimie et Biologie, 2 rue Escarpit, 33600, Pessac, France.
Thomas BotzanowskiLaboratoire de Spectrométrie de Masse BioOrganique, Université de Strasbourg, CNRS UMR7178, IPHC, Strasbourg, France.
Moeen MeigooniNIH Center for Macromolecular Modeling and Bioinformatics, Beckman Institute for Advanced Science and Technology, Center for Biophysics and Quantitative Biology and Department of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Andres S ArangoNIH Center for Macromolecular Modeling and Bioinformatics, Beckman Institute for Advanced Science and Technology, Center for Biophysics and Quantitative Biology and Department of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Jimmy DoNIH Center for Macromolecular Modeling and Bioinformatics, Beckman Institute for Advanced Science and Technology, Center for Biophysics and Quantitative Biology and Department of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Maxim MayzelSwedish NMR Centre, University of Gothenburg, Box 465, 405 30, Gothenburg, Sweden.ORCID http://orcid.org/0000-0002-7413-0444
Mariam BayoumiBiochemistry, Molecular and Structural Biology Section, University of Leuven, Celestijnenlaan 200G, 3001, Leuven, Belgium.
Stéphane ChaignepainUniversity of Bordeaux, CBMN (UMR 5248)-CNRS-IPB, Institut Européen de Chimie et Biologie, 2 rue Escarpit, 33600, Pessac, France.
Giovanni MagliaGroningen Biomolecular Sciences & Biotechnology Institute, University of Groningen, 9747 AG, Groningen, The Netherlands.ORCID http://orcid.org/0000-0003-2784-0811
Sarah CianferaniLaboratoire de Spectrométrie de Masse BioOrganique, Université de Strasbourg, CNRS UMR7178, IPHC, Strasbourg, France.
Vladislav OrekhovSwedish NMR Centre, University of Gothenburg, Box 465, 405 30, Gothenburg, Sweden.
Emad TajkhorshidNIH Center for Macromolecular Modeling and Bioinformatics, Beckman Institute for Advanced Science and Technology, Center for Biophysics and Quantitative Biology and Department of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.ORCID http://orcid.org/0000-0001-8434-1010
Benjamin BardiauxStructural Bioinformatics Unit, Department of Structural Biology and Chemistry, C3BI, Institut Pasteur; CNRS UMR3528; CNRS USR3756, Paris, France.ORCID http://orcid.org/0000-0003-4014-9195
Natàlia CarullaUniversity of Bordeaux, CBMN (UMR 5248)-CNRS-IPB, Institut Européen de Chimie et Biologie, 2 rue Escarpit, 33600, Pessac, France. natalia.carulla@gmail.com.ORCID http://orcid.org/0000-0002-3787-978X
Centre National de la Recherche Scientifique · FRUniversity of Illinois Urbana-Champaign · USUniversity of Gothenburg · SEKU Leuven · BEUniversity of Groningen · NL

Funding

WHOLE CELL SIMULATIONP41GM104601 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI TAJKHORSHID, EMAD · 2012 to 2021
$19.0M
Toolkit for High-Resolution Structure and Dynamics of Functional LipidsR01GM123455 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI MORRISSEY, JAMES H., RIENSTRA, CHAD M · 2016 to 2020
$5.0M
NIGMS NIH HHS P41 GM104601NIGMS NIH HHS R01 GM123455
6 · The paper itself

Abstract

Formation of amyloid-beta (Aβ) oligomer pores in the membrane of neurons has been proposed to explain neurotoxicity in Alzheimer's disease (AD). Here, we present the three-dimensional structure of an Aβ oligomer formed in a membrane mimicking environment, namely an Aβ(1-42) tetramer, which comprises a six stranded β-sheet core. The two faces of the β-sheet core are hydrophobic and surrounded by the membrane-mimicking environment while the edges are hydrophilic and solvent-exposed. By increasing the concentration of Aβ(1-42) in the sample, Aβ(1-42) octamers are also formed, made by two Aβ(1-42) tetramers facing each other forming a β-sandwich structure. Notably, Aβ(1-42) tetramers and octamers inserted into lipid bilayers as well-defined pores. To establish oligomer structure-membrane activity relationships, molecular dynamics simulations were carried out. These studies revealed a mechanism of membrane disruption in which water permeation occurred through lipid-stabilized pores mediated by the hydrophilic residues located on the core β-sheets edges of the oligomers.

Indexed as

Molecular Dynamics SimulationProtein ConformationProtein MultimerizationAlzheimer DiseaseAmyloid beta-PeptidesCell MembraneElectric ConductivityHumansHydrophobic and Hydrophilic InteractionsLipid BilayersNeurotoxicity SyndromesPeptide FragmentsWaterAmyloid beta-Peptidesamyloid beta-protein (1-42)Lipid BilayersPeptide FragmentsWater

Identifiers

PMID32541820
PMCPMC7296003
OpenAlexW3034762187

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.