Evidence map›Paper›PMID 32539870›Full record

ArticleInfection control and hospital epidemiology2020

Epidemiological and genetic characterization of

Yinping Dong, Ying Li, Di Zhang, Scott Nguyen, Nikunj Maheshwari, Yujie Hu, Yu Cao, Fengqin Li, Séamus Fanning

Open access · hybridAbstract read
In one paragraph

Article in Infection control and hospital epidemiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Detection ofVirulence · 2025
    Article
  2. Comparative genomics ofMicrobial genomics · 2025
    Article
  3. Article
  4. Article
  5. Case Report:Frontiers in pediatrics · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Yinping DongNHC Key Laboratory of Food Safety Risk Assessment, China National Center for Food Safety Risk Assessment, Beijing, PR China.
Ying LiChildren's Hospital Affiliated with Capital Institute of Pediatrics, Beijing, PR China.
Di ZhangChildren's Hospital Affiliated with Capital Institute of Pediatrics, Beijing, PR China.
Scott NguyenSchool of Public Health, Physiotherapy & Sports Science, University College of Dublin, Dublin, Ireland.
Nikunj MaheshwariSchool of Public Health, Physiotherapy & Sports Science, University College of Dublin, Dublin, Ireland.
Yujie HuNHC Key Laboratory of Food Safety Risk Assessment, China National Center for Food Safety Risk Assessment, Beijing, PR China.
Yu CaoSchool of Public Health, Physiotherapy & Sports Science, University College of Dublin, Dublin, Ireland.
Fengqin LiNHC Key Laboratory of Food Safety Risk Assessment, China National Center for Food Safety Risk Assessment, Beijing, PR China.
Séamus FanningNHC Key Laboratory of Food Safety Risk Assessment, China National Center for Food Safety Risk Assessment, Beijing, PR China.
University College Dublin · IEChina National Center for Food Safety Risk Assessment · CNCapital Institute of Pediatrics · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveLaboratory-based characterization and traceback of Clostridium butyricum isolates linked to outbreak cases of neonatal necrotizing enterocolitis (NEC) in a hospital in China.

methodsIn total, 37 samples were collected during the NEC outbreak. Classical bacteriological methods were applied to isolate and identify Clostridium spp. Meanwhile, 24 samples collected after an outbreak were similarly tested. All Clostridium isolates were identified to species level as either C. butyricum or C. sporogenes. These isolates were subsequently subtyped using pulsed-field gel electrophoresis (PFGE). Genomic DNA was purified from 2 representative C. butyricum isolates and sequenced to completion.

resultsOf 37 samples collected during the NEC outbreak, 17 (45.95%) were positive for Clostridium spp. One species, C. butyricum, was cultured from 10 samples. Another species cultured from 2 other samples was identified as C. sporogenes. Both of these species were cocultured from 5 samples. Pulsotyping showed that the 15 C. butyricum and the 7 C. sporogenes isolates produced indistinguishable DNA profiles. No NEC cases were reported after disinfection following the outbreak, and all samples collected after the outbreak were negative for Clostridium spp. Whole-genome sequencing (WGS) indicated that sialidase, hemolysin, and enterotoxin virulence factors were located on the chromosomes of 2 C. butyricum isolates.

conclusionsThe outbreak of NEC was epidemiologically linked to C. butyricum contamination within the hospital. This is the first report of an NEC outbreak associated with C. butyricum infection in China.

Indexed as

Clostridium butyricumEnterocolitis, NecrotizingInfant, Newborn, DiseasesClostridiumElectrophoresis, Gel, Pulsed-FieldHumansInfant, Newborn

Identifiers

PMID32539870
PMCPMC7511950
OpenAlexW3034275931

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.