Evidence map›Paper›PMID 32539762›Full record

ArticleBreast cancer research : BCR2020

Age-associated genes in human mammary gland drive human breast cancer progression.

Xiang Gu, Bingzhi Wang, Haiyan Zhu, You Zhou, Aaron M Horning, Tim H-M Huang, Yidong Chen, Peter Houghton, Zhao Lai, Joel E Michalek and 1 more

Open access · goldAbstract read
In one paragraph

Article in Breast cancer research : BCR, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Xiang GuDepartment of Cell Systems & Anatomy, School of Medicine, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Bingzhi WangDepartment of Cell Systems & Anatomy, School of Medicine, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Haiyan ZhuDepartment of Cell Systems & Anatomy, School of Medicine, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
You ZhouDepartment of Cell Systems & Anatomy, School of Medicine, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Aaron M HorningDepartment of Molecular Medicine, School of Medicine, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Tim H-M HuangDepartment of Molecular Medicine, School of Medicine, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Yidong ChenDepartment of Epidemiology & Biostatistics, School of Medicine, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Peter HoughtonGreehey Children's Cancer Research Institute, School of Medicine, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Zhao LaiDepartment of Molecular Medicine, School of Medicine, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Joel E MichalekDepartment of Epidemiology & Biostatistics, School of Medicine, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Lu-Zhe SunDepartment of Cell Systems & Anatomy, School of Medicine, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA. sunl@uthscsa.edu.ORCID 0000-0001-7117-4559
The University of Texas Health Science Center at San Antonio · USCentral South University · CN

Funding

TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Lei Zheng · 1991 to 2026
$59.1M
Systems Analysis of Epigenomic Architecture in Cancer ProgressionU54CA217297 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HUANG, TIM H.-M. · 2017 to 2021
$9.3M
Cancer Biology Training ProgramT32CA148724 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Pei Wang, Feng-Chun Yang · 2011 to 2026
$3.3M
Aging mammary stem cells and breast cancer preventionR01CA192564 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI SUN, LUZHE · 2015 to 2019
$2.0M
NCI NIH HHS P30 CA054174NCI NIH HHS R01 CA192564NCI NIH HHS T32 CA148724NCI NIH HHS U54 CA217297
6 · The paper itself

Abstract

backgroundAging is a comorbidity of breast cancer suggesting that aging-associated transcriptome changes may promote breast cancer progression. However, the mechanism underlying the age effect on breast cancer remains poorly understood.

methodWe analyzed transcriptomics of the matched normal breast tissues from the 82 breast cancer patients in The Cancer Genome Atlas (TCGA) dataset with linear regression for genes with age-associated expression that are not associated with menopause. We also analyzed differentially expressed genes between the paired tumor and non-tumor breast tissues in TCGA for the identification of age and breast cancer (ABC)-associated genes. A few of these genes were selected for further investigation of their malignancy-regulating activities with in vitro and in vivo assays.

resultsWe identified 148 upregulated and 189 downregulated genes during aging. Overlapping of tumor-associated genes between normal and tumor tissues with age-dependent genes resulted in 14 upregulated and 24 downregulated genes that were both age and breast cancer associated. These genes are predictive in relapse-free survival, indicative of their potential tumor promoting or suppressive functions, respectively. Knockdown of two upregulated genes (DYNLT3 and P4HA3) or overexpression of the downregulated ALX4 significantly reduced breast cancer cell proliferation, migration, and clonogenicity. Moreover, knockdown of P4HA3 reduced growth and metastasis whereas overexpression of ALX4 inhibited the growth of xenografted breast cancer cells in mice.

conclusionOur study suggests that transcriptome alterations during aging may contribute to breast tumorigenesis. DYNLT3, P4HA3, and ALX4 play significant roles in breast cancer progression.

Indexed as

AdultAgedAged, 80 and overAge FactorsAnimalsBiomarkers, TumorBreastBreast NeoplasmsDisease ProgressionDyneinsFemaleGene Expression Regulation, NeoplasticHeterograftsHumansMiceMice, Inbred NODBiomarkers, TumorDyneinsDYNLT3 protein, humanP4HA3 protein, humanProcollagen-Proline DioxygenaseAgingALX4Breast cancerDYNLT3Gene expressionP4HA3Relapse-free survivalTranscriptomicsTumor progression

Identifiers

PMID32539762
PMCPMC7294649
OpenAlexW3034974972

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.