Evidence map›Paper›PMID 32537835›Full record

ArticleAngewandte Chemie (International ed. in English)2020

TEAD-YAP Interaction Inhibitors and MDM2 Binders from DNA-Encoded Indole-Focused Ugi Peptidomimetics.

Verena B K Kunig, Marco Potowski, Mohammad Akbarzadeh, Mateja Klika Škopić, Denise Dos Santos Smith, Lukas Arendt, Ina Dormuth, Hélène Adihou, Blaž Andlovic, Hacer Karatas and 11 more

Abstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
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  5. Article
  6. Article
  7. FSOACS medicinal chemistry letters · 2024
    Article
  8. Article
  9. Article
  10. Mask and Release Strategy-Enabled Diversity-Oriented Synthesis for DNA-Encoded Library.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  11. Small-molecule discovery through DNA-encoded libraries.Nature reviews. Drug discovery · 2023
    Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. Chemically Stabilized DNA Barcodes for DNA-Encoded Chemistry.Angewandte Chemie (International ed. in English) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Verena B K KunigTU Dortmund University, Faculty of Chemistry and Chemical Biology, Otto-Hahn-Strasse 6, 44227, Dortmund, Germany.
Marco PotowskiTU Dortmund University, Faculty of Chemistry and Chemical Biology, Otto-Hahn-Strasse 6, 44227, Dortmund, Germany.
Mohammad AkbarzadehMax Planck Institute of Molecular Physiology, Department of Chemical Biology, Otto-Hahn-Strasse 11, 44227, Dortmund, Germany.
Mateja Klika ŠkopićTU Dortmund University, Faculty of Chemistry and Chemical Biology, Otto-Hahn-Strasse 6, 44227, Dortmund, Germany.
Denise Dos Santos SmithTU Dortmund University, Faculty of Chemistry and Chemical Biology, Otto-Hahn-Strasse 6, 44227, Dortmund, Germany.
Lukas ArendtTU Dortmund University, Faculty of Statistics, Vogelpothsweg 87, 44227, Dortmund, Germany.
Ina DormuthTU Dortmund University, Faculty of Statistics, Vogelpothsweg 87, 44227, Dortmund, Germany.
Hélène AdihouMedicinal Chemistry, Research and Early Development, Cardiovascular, Renal and Metabolism (CVRM), BioPharmaceuticals R&D, AstraZeneca, 43150, Gothenburg, Sweden.
Blaž AndlovicLead Discovery Center GmbH (Germany), Otto-Hahn-Strasse 15, 44227, Dortmund, Germany.
Hacer KaratasMax Planck Institute of Molecular Physiology, Department of Chemical Biology, Otto-Hahn-Strasse 11, 44227, Dortmund, Germany.
Shabnam ShaabaniUniversity of Groningen, Drug Design, Deusinglaan 1, 7313, AV, Groningen, The Netherlands.
Tryfon Zarganes-TzitzikasUniversity of Groningen, Drug Design, Deusinglaan 1, 7313, AV, Groningen, The Netherlands.
Constantinos G NeochoritisUniversity of Groningen, Drug Design, Deusinglaan 1, 7313, AV, Groningen, The Netherlands.
Ran ZhangUniversity of Groningen, Drug Design, Deusinglaan 1, 7313, AV, Groningen, The Netherlands.
Matthew GrovesUniversity of Groningen, Drug Design, Deusinglaan 1, 7313, AV, Groningen, The Netherlands.
Stéphanie M GuéretMedicinal Chemistry, Research and Early Development, Cardiovascular, Renal and Metabolism (CVRM), BioPharmaceuticals R&D, AstraZeneca, 43150, Gothenburg, Sweden.
Christian OttmannLaboratory of Chemical Biology, Department of Biomedical Engineering and Institute for Complex Molecular Systems, Eindhoven University of Technology, Den Dolech 2, 5612, AZ, Eindhoven, The Netherlands.
Jörg RahnenführerTU Dortmund University, Faculty of Statistics, Vogelpothsweg 87, 44227, Dortmund, Germany.
Roland FriedTU Dortmund University, Faculty of Statistics, Vogelpothsweg 87, 44227, Dortmund, Germany.
Alexander DömlingUniversity of Groningen, Drug Design, Deusinglaan 1, 7313, AV, Groningen, The Netherlands.
Andreas BrunschweigerTU Dortmund University, Faculty of Chemistry and Chemical Biology, Otto-Hahn-Strasse 6, 44227, Dortmund, Germany.ORCID 0000-0002-4401-1495

Funding

Real-time discovery of inhibitors among billion compounds for preview and downloadR01GM097082 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CAMACHO, CARLOS J. · 2011 to 2020
$2.5M
NIGMS NIH HHS R01 GM097082
6 · The paper itself

Abstract

DNA-encoded combinatorial synthesis provides efficient and dense coverage of chemical space around privileged molecular structures. The indole side chain of tryptophan plays a prominent role in key, or "hot spot", regions of protein-protein interactions. A DNA-encoded combinatorial peptoid library was designed based on the Ugi four-component reaction by employing tryptophan-mimetic indole side chains to probe the surface of target proteins. Several peptoids were synthesized on a chemically stable hexathymidine adapter oligonucleotide "hexT", encoded by DNA sequences, and substituted by azide-alkyne cycloaddition to yield a library of 8112 molecules. Selection experiments for the tumor-relevant proteins MDM2 and TEAD4 yielded MDM2 binders and a novel class of TEAD-YAP interaction inhibitors that perturbed the expression of a gene under the control of these Hippo pathway effectors.

Indexed as

PeptidomimeticsDNAHumansIndolesProtein BindingProto-Oncogene Proteins c-mdm2Transcription FactorsDNAIndolesMDM2 protein, humanPeptidomimeticsProto-Oncogene Proteins c-mdm2Transcription Factorscombinatorial chemistryDNA-encoded librarypeptidomimeticsprotein-protein interaction inhibitionUgi reaction

Identifiers

PMID32537835
PMCPMC7689693

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.