Evidence map›Paper›PMID 32537792›Full record

ArticleJournal of clinical laboratory analysis2020

Association of phosphatase and tension homologue deleted on chromosome ten polymorphism rs1903858, but not serum levels with the risk of non-small-cell lung cancer: A case-control study.

Zhen Liang, Yuzhu Tang, Hao Li, Youjun Xie, Lingling Zhan

Open access · goldAbstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 95% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 0 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Zhen LiangDepartment of Clinical Laboratory, Red Cross Hospital of Yulin City, Yulin, China.ORCID https://orcid.org/0000-0001-8474-8750
Yuzhu TangDepartment of Clinical Laboratory, Ruikang Hospital Affiliated to Guangxi University of Chinese Medicine, Nanning, China.
Hao LiDepartment of Blood Transfusion, People's Hospital of Guangxi Zhuang Autonomous Region, Nanning, Guangxi, China.
Youjun XieDepartment of Clinical Laboratory, First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Lingling ZhanDepartment of Clinical Laboratory, First Affiliated Hospital of Guangxi Medical University, Nanning, China.ORCID https://orcid.org/0000-0002-5328-1622
Guangxi Medical University · CNGuangxi University of Chinese Medicine · CNThe People's Hospital of Guangxi Zhuang Autonomous Region · CNYulin Orthopedics Hospital of Chinese and Western Medicine · CN

Funding

Natural Science Foundation of Guangxi Province 2014GXNSFAA118276
6 · The paper itself

Abstract

backgroundTo investigate the association between phosphatase and tension homologue deleted on chromosome ten (PTEN) gene polymorphisms and non-small-cell lung cancer (NSCLC) and further identify whether these polymorphisms influence serum PTEN levels.

methodsA total of 152 NSCLC patients and 124 healthy controls were included in the study. PTEN gene rs11202586 (T > C) and rs1903858 (A > G) polymorphisms were detected using the multiple single-base extension technique (SNaPshot). The serum PTEN levels were determined using an enzyme-linked immunosorbent assay (ELISA) kit.

resultsThe rs1903858 AG, GG genotypes, and G allele were associated with a higher risk of NSCLC (odds ratio (OR) =2.079, 95% confidence interval (CI) = 1.087-3.974, P = .027; OR = 1.897, 95%CI = 1.053-3.419, P = .033; OR = 1.505, 95%CI = 1.065-2.126, P = .020). Stratified analysis reveal that the rs1903858 GG genotype and G allele were associated with an increased risk of squamous cell carcinoma (SCC) (OR = 3.226, 95%CI = 1.075-9.678, P = .037; OR = 1.873, 95%CI = 1.092-3.212, P = .023). Among smokers, the rs1903858 G allele carriers have an increased risk of NSCLC (OR = 1.916, 95%CI = 1.023-3.589, P = .042), but a decreased risk of NSCLC was found with the AT haplotype. With respect to the serum PTEN levels, no significant difference was noted between NSCLC patients and healthy controls in this study.

conclusionsThe study indicated that the rs1903858 gene polymorphism is associated with increased risk of NSCLC, particularly in SCC and smoker, and the haplotype AT was a protective factor for NSCLC. The serum PTEN levels were not associated with NSCLC.

Indexed as

Carcinoma, Non-Small-Cell LungLung NeoplasmsPTEN PhosphohydrolaseAgedCase-Control StudiesFemaleHaplotypesHumansMaleMiddle AgedPolymorphism, Single NucleotidePTEN PhosphohydrolasePTEN protein, humangene polymorphismnon-small-cell lung cancer (NSCLC)phosphatase and tension homologue deleted on chromosome ten (PTEN)

Identifiers

PMID32537792
PMCPMC7439348
OpenAlexW3034356861

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.