Evidence map›Paper›PMID 32537538›Full record

ArticleNetwork neuroscience (Cambridge, Mass.)2020

The sensitivity of network statistics to incomplete electrode sampling on intracranial EEG.

Erin C Conrad, John M Bernabei, Lohith G Kini, Preya Shah, Fadi Mikhail, Ammar Kheder, Russell T Shinohara, Kathryn A Davis, Danielle S Bassett, Brian Litt

Abstract read
In one paragraph

Article in Network neuroscience (Cambridge, Mass.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

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  6. Network excitability of stimulation-induced spectral responses helps localize the seizure onset zone.Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology · 2024
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  17. Time-evolving controllability of effective connectivity networks during seizure progression.Proceedings of the National Academy of Sciences of the United States of America · 2021
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  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Erin C ConradDepartment of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA.
John M BernabeiCenter for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA, USA.
Lohith G KiniCenter for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA, USA.
Preya ShahCenter for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA, USA.
Fadi MikhailDepartment of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA.
Ammar KhederDepartment of Neurology, Emory University, Atlanta, GA, USA.
Russell T ShinoharaDepartment of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania, Philadelphia, PA, USA.
Kathryn A DavisDepartment of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA.
Danielle S BassettDepartment of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA.
Brian LittDepartment of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA.

Funding

Statistical Methods for Multilevel Multivariate Functional StudiesR01NS060910 · NINDS · JOHNS HOPKINS UNIVERSITY · PI Ciprian M Crainiceanu · 2009 to 2026
$8.3M
Training Program in Neuroengineering and MedicineT32NS091006 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI Brian Litt · 2015 to 2026
$4.1M
Training Program in Biomedical Imaging and Information SciencesT32EB009384 · NIBIB · UNIVERSITY OF PENNSYLVANIA · PI GEE, JAMES C, IVES, ZACHARY · 2009 to 2023
$4.0M
Research Training Program in Disease Oriented Neuroscience (R25)R25NS065745 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI DETRE, JOHN A · 2009 to 2023
$3.0M
Virtual Resection to Treat EpilepsyR01NS099348 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI BASSETT, DANIELLE SMITH, LITT, BRIAN · 2016 to 2019
$2.3M
Localizing epileptic networks using novel 7T MRI glutamate imagingK23NS092973 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI DAVIS, KATHRYN ADAMIAK · 2016 to 2020
$980k
NIBIB NIH HHS T32 EB009384NINDS NIH HHS K23 NS092973NINDS NIH HHS R01 NS060910NINDS NIH HHS R01 NS099348NINDS NIH HHS R25 NS065745NINDS NIH HHS T32 NS091006
6 · The paper itself

Abstract

Network neuroscience applied to epilepsy holds promise to map pathological networks, localize seizure generators, and inform targeted interventions to control seizures. However, incomplete sampling of the epileptic brain because of sparse placement of intracranial electrodes may affect model results. In this study, we evaluate the sensitivity of several published network measures to incomplete spatial sampling and propose an algorithm using network subsampling to determine confidence in model results. We retrospectively evaluated intracranial EEG data from 28 patients implanted with grid, strip, and depth electrodes during evaluation for epilepsy surgery. We recalculated global and local network metrics after randomly and systematically removing subsets of intracranial EEG electrode contacts. We found that sensitivity to incomplete sampling varied significantly across network metrics. This sensitivity was largely independent of whether seizure onset zone contacts were targeted or spared from removal. We present an algorithm using random subsampling to compute patient-specific confidence intervals for network localizations. Our findings highlight the difference in robustness between commonly used network metrics and provide tools to assess confidence in intracranial network localization. We present these techniques as an important step toward translating personalized network models of seizures into rigorous, quantitative approaches to invasive therapy.

Indexed as

ElectrocorticographyEpilepsyGraph theoryIntracranial EEGJackknife subsamplingNetwork modelReliability

Identifiers

PMID32537538
PMCPMC7286312

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.