Evidence map›Paper›PMID 32535713›Full record

ArticleJournal of molecular neuroscience : MN2020

Identification of Core Genes and Pathways in Medulloblastoma by Integrated Bioinformatics Analysis.

Yuduo Guo, Peng Huang, Weihai Ning, Hongwei Zhang, Chunjiang Yu

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of molecular neuroscience : MN, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yuduo Guo *Department of Neurosurgery, Sanbo Brain Hospital, Capital Medical University, Beijing, China.
Peng Huang *Department of Neurosurgery, Sanbo Brain Hospital, Capital Medical University, Beijing, China.
Weihai NingDepartment of Neurosurgery, Sanbo Brain Hospital, Capital Medical University, Beijing, China.
Hongwei Zhang *Department of Neurosurgery, Sanbo Brain Hospital, Capital Medical University, Beijing, China. 62856705@163.com.
Chunjiang Yu *Department of Neurosurgery, Sanbo Brain Hospital, Capital Medical University, Beijing, China. yuchunjiang1955@163.com.
Beijing Sanbo Brain Hospital · CNCapital Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Medulloblastoma (MB) is one of the most common intracranial malignancies in children. The present study applied integrated bioinformatics to identify potential core genes associated with the pathogenesis of MB and reveal potential molecular mechanisms. Through the integrated analysis of multiple data sets from the Gene Expression Omnibus (GEO), 414 differentially expressed genes (DEGs) were identified. Combining the protein-protein interaction (PPI) network analysis with gene set enrichment analysis (GSEA), eight core genes, including CCNA2, CCNB1, CCNB2, AURKA, CDK1, MAD2L1, BUB1B, and RRM2, as well as four core pathways, including "cell cycle", "oocyte meiosis", "p53 pathway" and "DNA replication" were selected. In independent data sets, the core genes showed superior diagnostic values and significant prognostic correlations. Moreover, in the pan-caner data of the cancer genome atlas (TCGA), the core genes were also widely abnormally expressed. In conclusion, this study identified core genes and pathways of MB through integrated analysis to deepen the understanding of the molecular mechanisms underlying the MB and provide potential targets and pathways for diagnosis and treatment of MB.

Indexed as

Gene Regulatory NetworksGenetic LociProtein Interaction MapsBrain NeoplasmsComputational BiologyHumansMedulloblastomaBioinformatics analysisDifferentially expressed genesGEOMedulloblastomaPathwaysTCGA

Identifiers

PMID32535713
OpenAlexW3035427446

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.